Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS16Q9H269 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.22□□□□□ -1.89
VPS16Q9H269 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS16Q9H269 HMGN2P10-201ENST00000448085 265 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 RN7SL504P-201ENST00000494496 287 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 AC008885.1-201ENST00000514930 301 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS16Q9H269 AC113195.1-201ENST00000579952 141 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 MIR3668-201ENST00000582138 75 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 AL451007.1-201ENST00000595491 289 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 AC078899.3-201ENST00000599065 212 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 ELOCP5-201ENST00000604924 333 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 AC018889.1-201ENST00000605372 397 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VPS16Q9H269 MIR6134-201ENST00000617606 109 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 U4.1-201ENST00000620349 87 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 AL161431.1-201ENST00000618966 4205 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
VPS16Q9H269 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VPS16Q9H269 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
VPS16Q9H269 Y_RNA.80-201ENST00000362996 102 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 RNU1-105P-201ENST00000363470 161 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 RNU6-214P-201ENST00000384130 107 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 Y_RNA.455-201ENST00000384230 98 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 Y_RNA.485-201ENST00000384395 102 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 MIR181A2-201ENST00000384863 110 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 RN7SKP220-201ENST00000410611 288 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS16Q9H269 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS16Q9H269 MRPS18CP6-201ENST00000423587 223 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 AL365496.1-201ENST00000426885 215 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS16Q9H269 AC093151.1-201ENST00000427711 313 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 AC096644.2-201ENST00000429278 159 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 AC104332.2-201ENST00000429959 156 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 RPL21P2-201ENST00000440049 481 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 FTH1P25-201ENST00000447665 469 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 RNU7-138P-201ENST00000459479 64 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 AC113155.1-201ENST00000511141 769 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS16Q9H269 RN7SKP272-201ENST00000516988 232 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS16Q9H269 AC021739.1-201ENST00000559631 174 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS16Q9H269 SRGNP1-201ENST00000603392 451 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VPS16Q9H269 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS16Q9H269 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS16Q9H269 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS16Q9H269 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS16Q9H269 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS16Q9H269 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS16Q9H269 ADAM3A-203ENST00000461344 2157 ntBASIC3.21□□□□□ -1.9
VPS16Q9H269 AC008669.1-201ENST00000565823 2178 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 Y_RNA.2-201ENST00000362330 96 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 Y_RNA.151-201ENST00000363566 112 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 RNU6-799P-201ENST00000363567 107 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 RNU1-115P-201ENST00000365329 160 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 U8.9-201ENST00000365667 134 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 SNORD73A-201ENST00000386062 65 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 U3.37-201ENST00000408528 213 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 RNA5SP344-201ENST00000411081 104 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 PGBD4P6-201ENST00000421501 610 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS16Q9H269 CBX3P6-201ENST00000430257 527 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 AL645568.3-201ENST00000433683 316 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.2□□□□□ -1.9
VPS16Q9H269 RPS15AP5-201ENST00000436276 388 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS16Q9H269 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS16Q9H269 U8.20-201ENST00000459445 131 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 RN7SL807P-201ENST00000470923 297 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS16Q9H269 AC116655.1-201ENST00000508324 901 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS16Q9H269 RNU4-77P-201ENST00000516692 156 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 RNU6-794P-201ENST00000517261 64 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS16Q9H269 AC104576.1-201ENST00000524225 88 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS16Q9H269 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS16Q9H269 AC024220.1-201ENST00000603675 484 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 NUTF2P8-201ENST00000604593 363 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 SNORD58B-201ENST00000607313 66 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS16Q9H269 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
VPS16Q9H269 AL035425.3-201ENST00000564206 4996 ntBASIC3.2□□□□□ -1.9
VPS16Q9H269 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
VPS16Q9H269 AC091564.4-201ENST00000533934 2194 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 AC005592.1-201ENST00000566527 1640 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS16Q9H269 RNU6-898P-201ENST00000365627 104 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 RNU6-1329P-201ENST00000365664 107 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 RNU6-784P-201ENST00000384330 106 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 Y_RNA.574-201ENST00000384766 95 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 MT-TG-201ENST00000387429 68 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 NUP35P1-201ENST00000422734 947 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 UBE2V1P4-201ENST00000425374 344 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 BX510359.1-201ENST00000456973 237 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms