Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 RNU4-9P-201ENST00000364951 139 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 RNA5SP235-201ENST00000365411 114 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 SNORD63-201ENST00000384262 68 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 MIR613-201ENST00000385248 95 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 SNORD78.2-201ENST00000391076 69 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 BTF3L4P2-201ENST00000392798 346 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 AL033519.2-201ENST00000403958 392 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 RNU6-735P-201ENST00000410612 107 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 AL590383.1-201ENST00000428602 75 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 RPS26P3-201ENST00000470205 348 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 AC004057.1-201ENST00000485827 348 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 AC087441.2-201ENST00000529141 262 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 MZT1P2-201ENST00000604387 248 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 AP002826.1-201ENST00000608835 315 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 AC240442.1-201ENST00000616055 283 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 AC022149.2-201ENST00000621061 203 ntBASIC4.21□□□□□ -1.74
CNTNAP4Q9C0A0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 Y_RNA.143-201ENST00000363520 106 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 RNU5E-7P-201ENST00000365290 117 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 HMGN2P8-201ENST00000391458 268 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 RNA5SP39-201ENST00000411245 120 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 AC004552.1-201ENST00000419089 348 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 RPL21P40-201ENST00000428586 483 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 AC006026.2-201ENST00000457376 180 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 snoU13.30-201ENST00000458951 104 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 RNU7-87P-201ENST00000459343 62 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 COX6CP14-201ENST00000469580 174 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 AC090543.2-201ENST00000483963 348 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 SNORA25.14-201ENST00000516481 132 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 AP004371.1-201ENST00000525240 214 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 MIR4643-201ENST00000577473 78 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 MIR7106-201ENST00000612419 65 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 AL365265.1-201ENST00000621045 234 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 AC006065.5-201ENST00000623427 349 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 SCARNA4-202ENST00000625402 129 ntBASIC4.2□□□□□ -1.74
CNTNAP4Q9C0A0 AP001148.1-201ENST00000624124 2359 ntBASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 RNU1-70P-201ENST00000362618 164 ntBASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 RNU6-741P-201ENST00000383889 107 ntBASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 RNU6-166P-201ENST00000384371 107 ntBASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 RNU2-20P-201ENST00000410425 191 ntBASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 AL078601.1-201ENST00000444542 271 ntBASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 RPS26P15-201ENST00000488067 348 ntBASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 SEPT14P8-201ENST00000508026 178 ntBASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 AC010265.1-201ENST00000513509 211 ntBASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 SNORA31.19-201ENST00000517079 126 ntBASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 AC097372.5-201ENST00000623665 376 ntBASIC4.19□□□□□ -1.74
CNTNAP4Q9C0A0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 RNU4-90P-201ENST00000362773 141 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 Y_RNA.123-201ENST00000363338 102 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 Y_RNA.199-201ENST00000364014 102 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 RNY1P5-201ENST00000383890 115 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 SNORA7.4-201ENST00000384249 137 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 AL357552.1-201ENST00000445254 415 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 SERF1AP1-201ENST00000514575 187 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 SNORA31.20-201ENST00000517111 133 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 AC060766.3-201ENST00000591442 263 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 AC006023.1-201ENST00000603944 259 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 U2.14-201ENST00000615943 113 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 AC018692.3-201ENST00000623929 123 ntBASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CNTNAP4Q9C0A0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms