Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 Y_RNA.793-201ENST00000411222 111 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 AC006989.1-201ENST00000427212 131 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 ARF4P2-201ENST00000430209 526 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 RPS15AP7-201ENST00000439294 405 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 AC098831.1-201ENST00000440661 216 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 RPS29P31-201ENST00000446147 164 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 AF186996.7-201ENST00000492781 209 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 RNU1-103P-201ENST00000516502 125 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 RNVU1-4-201ENST00000612985 164 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 AC048347.1-201ENST00000624621 427 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 ZNF826P-207ENST00000622273 1910 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 SNORA31-201ENST00000362607 130 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 RNU6-778P-201ENST00000363269 103 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 RNU6-283P-201ENST00000364788 107 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 RNU6-898P-201ENST00000365627 104 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 RNU6-843P-201ENST00000384454 104 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 RNU6-658P-201ENST00000384606 106 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 MIR153-2-201ENST00000385225 87 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 RPL26P27-201ENST00000414397 437 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 AC017079.2-201ENST00000416102 485 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 RPL21P66-201ENST00000426566 466 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 AC005002.2-201ENST00000438228 269 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 AP000870.1-201ENST00000472927 406 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 RNU6-1114P-201ENST00000516022 107 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 MIR4738-201ENST00000579134 87 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 MIR5047-201ENST00000579212 100 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 AC008739.3-201ENST00000603262 127 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.88□□□□□ -1.79
FOXP3Q9BZS1 AL353743.1-202ENST00000431724 1695 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 AC091152.2-201ENST00000591628 2569 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 MIR411-201ENST00000362239 96 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 Y_RNA.199-201ENST00000364014 102 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 SNORD32A-201ENST00000364805 84 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 RNA5SP189-201ENST00000364920 115 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 RNU6-662P-201ENST00000384253 104 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 Y_RNA.504-201ENST00000384481 104 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 MIR493-201ENST00000385254 89 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 RPS4XP3-201ENST00000398541 413 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 AL033519.2-201ENST00000403958 392 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 RPL23AP95-201ENST00000426806 265 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 YME1L1P1-201ENST00000429435 297 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 AL512844.2-201ENST00000433990 593 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 RNU7-120P-201ENST00000459334 63 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 AC087477.1-201ENST00000465747 340 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 RPL23AP14-201ENST00000468281 468 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 RN7SL330P-201ENST00000469709 307 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 RN7SL323P-201ENST00000494712 295 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 AC091874.1-201ENST00000511402 339 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 RNU6-1212P-201ENST00000517023 104 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 AC016256.1-201ENST00000547971 354 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 AL356157.2-201ENST00000605122 111 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXP3Q9BZS1 SRP72P2-201ENST00000344851 1979 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 Y_RNA.44-201ENST00000362676 108 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 RNU6-545P-201ENST00000362681 104 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 Y_RNA.76-201ENST00000362931 109 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 SNORD46.1-201ENST00000364139 104 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 RNU6-879P-201ENST00000364328 108 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 SNORA73.2-201ENST00000364946 201 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 RNA5SP97-201ENST00000365006 84 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 RNU6-926P-201ENST00000384075 107 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 SNORA29-201ENST00000384183 140 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 RNU6-378P-201ENST00000384324 107 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 RN7SKP156-201ENST00000410308 342 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 SNORA57.3-201ENST00000411095 141 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 RNU6-1245P-201ENST00000411130 106 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms