Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 SNORD50.1-201ENST00000362987 71 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 RNU6-1141P-201ENST00000364520 107 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 Y_RNA.395-201ENST00000383945 109 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 RNU6-142P-201ENST00000384019 107 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 MIR483-201ENST00000385070 76 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AC004383.1-201ENST00000438135 289 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AC006028.1-201ENST00000438379 402 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AL031659.1-201ENST00000447075 539 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 RPL39P29-201ENST00000447779 157 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AP001324.2-201ENST00000461163 319 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 RPL17P19-201ENST00000489069 552 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AC022447.4-201ENST00000504053 364 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 SNRPGP18-201ENST00000553000 214 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AC007375.1-201ENST00000554513 578 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AC012493.2-201ENST00000595083 291 ntBASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM54Q9BYV2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 RNY1P16-201ENST00000363063 111 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 SNORD114-19-201ENST00000363072 75 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 SNORD32A-201ENST00000364805 84 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 NUP35P1-201ENST00000422734 947 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 RPL23AP95-201ENST00000426806 265 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 UQCRHP3-201ENST00000451503 251 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 RPS29P12-201ENST00000460178 152 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 AC016632.1-201ENST00000503994 196 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 MRPS36P2-201ENST00000512569 299 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 SCARNA13-201ENST00000516672 275 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 HSPE1P4-201ENST00000550617 308 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 MIR5696-201ENST00000578474 85 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 AL158827.2-201ENST00000602494 330 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 uc_338.25-201ENST00000613756 156 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 AC002064.3-201ENST00000623448 346 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 AL691447.3-201ENST00000635020 330 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 AC092435.3-201ENST00000565538 3654 ntBASIC3.12□□□□□ -1.91
TRIM54Q9BYV2 AC233981.2-201ENST00000611524 1614 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 MIR208A-201ENST00000362287 71 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 RNU6-1115P-201ENST00000362490 106 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 RNU6-968P-201ENST00000384076 107 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 RNU6-474P-201ENST00000384243 107 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 MIR183-201ENST00000384958 110 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 MIR559-201ENST00000385188 96 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AC243428.1-201ENST00000421099 264 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 MTCYBP6-201ENST00000441810 138 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AL513124.1-201ENST00000450410 614 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 PRSS3P4-201ENST00000453323 162 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AC079354.2-201ENST00000453523 154 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AC090096.1-201ENST00000489168 390 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AC104564.1-201ENST00000493028 407 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 Y_RNA.661-201ENST00000516003 99 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AC115990.1-201ENST00000526957 301 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AC005014.2-201ENST00000607795 599 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 uc_338.22-201ENST00000622722 187 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 U6.105-201ENST00000637379 88 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 AC099654.7-201ENST00000635788 2127 ntBASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM54Q9BYV2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 AC093831.2-201ENST00000624393 3427 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RNU6-212P-201ENST00000362642 104 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RNU6-1010P-201ENST00000362757 107 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms