Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC007494.3-201ENST00000624660 743 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 MTND5P10-201ENST00000603719 1809 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 OR4G2P-201ENST00000328113 903 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 MIR517C-201ENST00000385103 95 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 HMGN2P39-201ENST00000398005 273 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 AL365203.2-201ENST00000423444 196 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 CYCSP46-201ENST00000423569 204 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 AL365400.1-201ENST00000431854 640 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 AC009474.2-201ENST00000451383 136 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 AC006026.2-201ENST00000457376 180 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 NDUFA5P6-201ENST00000542110 379 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 MIR3682-201ENST00000581338 84 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 AC008250.2-201ENST00000615261 205 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 AC005296.1-201ENST00000616145 209 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 RMST_7.1-201ENST00000621935 268 ntBASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RPAP1Q9BWH6 SNORD115-7-201ENST00000365306 82 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 RNU6-174P-201ENST00000410406 106 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 RNU2-23P-201ENST00000410545 195 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 RNU6-195P-201ENST00000411352 109 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC000111.3-201ENST00000433478 193 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 GAPDHP17-201ENST00000449858 1001 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AL033528.1-201ENST00000453780 140 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 TOMM22P6-201ENST00000465035 409 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC104806.1-201ENST00000508720 308 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 MTND3P25-201ENST00000509243 135 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC109446.2-201ENST00000567872 497 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC026585.1-201ENST00000619582 524 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC138649.3-201ENST00000622154 254 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 RNU6-655P-201ENST00000362858 107 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 SNORA40.3-201ENST00000390964 122 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 RAP1BP3-201ENST00000407180 549 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 C1DP2-201ENST00000418167 426 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC009961.2-201ENST00000435771 251 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AL121594.1-201ENST00000475906 575 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AL161670.1-201ENST00000554348 137 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC098848.2-201ENST00000588023 330 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 AC078899.2-201ENST00000595282 212 ntBASIC1.85□□□□□ -2.11
RPAP1Q9BWH6 MTND5P17-201ENST00000418405 1603 ntBASIC1.84□□□□□ -2.11
RPAP1Q9BWH6 SNORD56.1-201ENST00000362913 68 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 RNU1-42P-201ENST00000364033 160 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 U3.13-201ENST00000364804 214 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 RNU6-116P-201ENST00000384042 109 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 SNORA67.6-201ENST00000391093 99 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 HMGN1P14-201ENST00000412459 517 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 OR6C66P-201ENST00000414917 930 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 MTCYBP1-201ENST00000454315 1119 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 snoU109.1-201ENST00000459339 135 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 MTCO3P9-201ENST00000506989 781 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 SNORA31.24-201ENST00000517232 57 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 AC026271.5-201ENST00000577873 130 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 MIR4421-201ENST00000578133 69 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 MIR4287-201ENST00000579398 78 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 SNORA4-201ENST00000584302 138 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 AC073539.2-201ENST00000597113 165 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 AC007792.1-201ENST00000623023 402 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 AC090517.3-201ENST00000625170 141 ntBASIC1.84□□□□□ -2.12
RPAP1Q9BWH6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 RNU6-1210P-201ENST00000363775 107 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 CBX3P9-201ENST00000402326 552 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 RNU2-48P-201ENST00000410694 191 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 BTF3L4P1-201ENST00000413813 468 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 AC096920.1-201ENST00000423991 241 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 ART2BP-201ENST00000453501 499 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 RPL30P12-201ENST00000474666 353 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 HMGB1P35-201ENST00000503360 598 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 RNU6-667P-201ENST00000517186 102 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 OR5AL2P-201ENST00000532185 920 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms