Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.17□□□□□ -1.9
VRK1Q99986 AC138305.3-201ENST00000624988 240 ntBASIC3.17□□□□□ -1.9
VRK1Q99986 MIR4272-201ENST00000635924 64 ntBASIC3.17□□□□□ -1.9
VRK1Q99986 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.17□□□□□ -1.9
VRK1Q99986 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VRK1Q99986 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.17□□□□□ -1.9
VRK1Q99986 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
VRK1Q99986 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VRK1Q99986 AL161912.2-201ENST00000565707 3007 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 RNA5SP51-201ENST00000364750 119 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 Y_RNA.504-201ENST00000384481 104 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 RNA5SP424-201ENST00000390988 115 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 MIR190B-201ENST00000401119 79 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 RNU6-985P-201ENST00000410182 104 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 AL358075.3-201ENST00000426289 226 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.16□□□□□ -1.9
VRK1Q99986 AC092423.1-201ENST00000430165 186 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.16□□□□□ -1.9
VRK1Q99986 GPM6BP3-201ENST00000442797 145 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 AL353705.4-201ENST00000449661 238 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 snoU13.14-201ENST00000459372 104 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 RNU6-911P-201ENST00000516523 104 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 SNORA40.14-201ENST00000516543 86 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 RNU6-1137P-201ENST00000517073 99 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.16□□□□□ -1.9
VRK1Q99986 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.16□□□□□ -1.9
VRK1Q99986 AC007375.1-201ENST00000554513 578 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 TGIF1P1-201ENST00000558095 802 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 AC021231.3-201ENST00000558497 370 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.16□□□□□ -1.9
VRK1Q99986 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 SNORD58B-201ENST00000607313 66 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 AC069200.1-201ENST00000609511 323 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 MIR1244-1-201ENST00000612829 85 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 AC137590.2-201ENST00000619709 240 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 AC091903.1-201ENST00000624322 454 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 MIR1244-3-201ENST00000635744 85 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 MIR1244-2-201ENST00000636449 85 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 MIR1244-4-202ENST00000636813 85 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 AL450472.1-202ENST00000637286 180 ntBASIC3.16□□□□□ -1.9
VRK1Q99986 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.16□□□□□ -1.9
VRK1Q99986 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VRK1Q99986 AC103988.1-201ENST00000566382 2177 ntBASIC3.15□□□□□ -1.9
VRK1Q99986 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.9
VRK1Q99986 RNA5SP119-201ENST00000362715 117 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 SNORD114-19-201ENST00000363072 75 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 Y_RNA.405-201ENST00000383979 100 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 Y_RNA.451-201ENST00000384200 100 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 Y_RNA.524-201ENST00000384564 100 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 Y_RNA.561-201ENST00000384694 100 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 AC093578.1-201ENST00000415219 368 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.15□□□□□ -1.91
VRK1Q99986 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.15□□□□□ -1.91
VRK1Q99986 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.15□□□□□ -1.91
VRK1Q99986 CYCSP35-201ENST00000451978 304 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 AC112492.4-201ENST00000456549 352 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 AC106707.2-201ENST00000484182 374 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.15□□□□□ -1.91
VRK1Q99986 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.15□□□□□ -1.91
VRK1Q99986 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.15□□□□□ -1.91
VRK1Q99986 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.15□□□□□ -1.91
VRK1Q99986 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.15□□□□□ -1.91
VRK1Q99986 AC010928.2-201ENST00000588017 287 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 AC008737.2-201ENST00000599446 118 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 RPL23AP78-201ENST00000599928 470 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 AC006557.5-201ENST00000603126 811 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 AL162730.1-201ENST00000605734 292 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 RMST_6.1-201ENST00000611980 203 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 MTND5P27-201ENST00000428871 1720 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 AL109809.4-201ENST00000603520 2185 ntBASIC3.15□□□□□ -1.91
VRK1Q99986 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.15□□□□□ -1.91
VRK1Q99986 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.14□□□□□ -1.91
VRK1Q99986 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VRK1Q99986 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.14□□□□□ -1.91
VRK1Q99986 SNORA63.1-201ENST00000362493 131 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 RNA5SP387-201ENST00000364226 106 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 CD24P4-201ENST00000382840 243 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 RNU6-17P-201ENST00000384245 107 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 RNU6-18P-201ENST00000384527 107 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 SNORA69.1-201ENST00000390904 137 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 Y_RNA.645-201ENST00000391229 102 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 SAR1AP2-201ENST00000392696 594 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AL133475.1-201ENST00000404414 305 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AC138623.1-201ENST00000418060 216 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 RPL21P40-201ENST00000428586 483 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 MTCO3P29-201ENST00000432119 779 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.14□□□□□ -1.91
VRK1Q99986 Z82188.1-201ENST00000436709 154 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.14□□□□□ -1.91
VRK1Q99986 AC009296.1-201ENST00000443146 155 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 CHEK2P4-201ENST00000450340 246 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AL353752.1-201ENST00000454946 260 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AP001324.2-201ENST00000461163 319 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AC091179.1-201ENST00000461606 579 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 SNRPGP7-201ENST00000469016 106 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 AF186996.7-201ENST00000492781 209 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 Y_RNA.706-201ENST00000516933 99 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 Y_RNA.720-201ENST00000517166 92 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 Y_RNA.721-201ENST00000517207 102 ntBASIC3.14□□□□□ -1.91
VRK1Q99986 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms