Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.66□□□□□ -2.14
CDX2Q99626 AL590365.1-201ENST00000450788 243 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.66□□□□□ -2.14
CDX2Q99626 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.66□□□□□ -2.14
CDX2Q99626 PMCHL2-203ENST00000457791 237 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AC011005.2-201ENST00000487324 359 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.66□□□□□ -2.14
CDX2Q99626 AF213884.2-201ENST00000510417 903 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AC079140.3-201ENST00000511111 550 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 Y_RNA.695-201ENST00000516715 107 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 SNORA31.25-201ENST00000517242 134 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 RNU2-19P-201ENST00000517288 84 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.66□□□□□ -2.14
CDX2Q99626 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.66□□□□□ -2.14
CDX2Q99626 AP003033.1-201ENST00000527244 415 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AC011979.2-201ENST00000527568 352 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 CBX3P7-201ENST00000532876 502 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.66□□□□□ -2.14
CDX2Q99626 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.66□□□□□ -2.14
CDX2Q99626 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.66□□□□□ -2.14
CDX2Q99626 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.66□□□□□ -2.14
CDX2Q99626 AC104581.2-201ENST00000572227 430 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 MIR4287-201ENST00000579398 78 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AC078899.2-201ENST00000595282 212 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AL590229.1-201ENST00000603497 542 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AC064872.1-201ENST00000604823 1072 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 RNU6-91P-201ENST00000607774 107 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.66□□□□□ -2.14
CDX2Q99626 AC027807.2-201ENST00000616099 408 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 U4atac.1-201ENST00000618345 95 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AC008121.3-201ENST00000618726 433 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AC098679.4-201ENST00000624241 654 ntBASIC1.66□□□□□ -2.14
CDX2Q99626 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.66□□□□□ -2.14
CDX2Q99626 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.66□□□□□ -2.14
CDX2Q99626 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.65□□□□□ -2.14
CDX2Q99626 MTND4P5-201ENST00000435821 1374 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 Y_RNA.22-201ENST00000362492 102 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 Y_RNA.77-201ENST00000362962 107 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 RNU6-395P-201ENST00000365662 106 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 RNU6-39P-201ENST00000384344 107 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CDX2Q99626 MIR548J-201ENST00000408833 112 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 Y_RNA.599-201ENST00000410489 109 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.65□□□□□ -2.15
CDX2Q99626 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.65□□□□□ -2.15
CDX2Q99626 RPL22P17-201ENST00000438729 315 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 MTCO2P18-201ENST00000457151 658 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 RPL31P3-201ENST00000458430 332 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 AP000797.1-201ENST00000478870 387 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.65□□□□□ -2.15
CDX2Q99626 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.65□□□□□ -2.15
CDX2Q99626 MRPS17P9-201ENST00000511924 393 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 SMURF2P1-201ENST00000514992 481 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 RNU5B-3P-201ENST00000516601 115 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 RNU6-143P-201ENST00000516942 93 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.65□□□□□ -2.15
CDX2Q99626 NBR2-204ENST00000587322 63 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 HMGN1P30-201ENST00000589286 268 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 RNU6-87P-201ENST00000607561 108 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 uc_338.20-201ENST00000621563 178 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 AC009878.1-201ENST00000621819 340 ntBASIC1.65□□□□□ -2.15
CDX2Q99626 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CDX2Q99626 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
CDX2Q99626 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CDX2Q99626 Z75746.1-201ENST00000440243 2080 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 RNU5E-1-201ENST00000362477 120 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 SNORD3E-201ENST00000362899 217 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 RNU6-942P-201ENST00000363002 107 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 SNORD56.2-201ENST00000363242 71 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 Y_RNA.201-201ENST00000364052 96 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CDX2Q99626 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
CDX2Q99626 FTH1P15-201ENST00000406984 280 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.64□□□□□ -2.15
CDX2Q99626 BX510359.4-201ENST00000423750 193 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.64□□□□□ -2.15
CDX2Q99626 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.64□□□□□ -2.15
CDX2Q99626 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.64□□□□□ -2.15
CDX2Q99626 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.64□□□□□ -2.15
CDX2Q99626 MTCO3P5-201ENST00000433620 714 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 MTCO2P7-201ENST00000446518 666 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 NDUFB1P2-201ENST00000449477 176 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.64□□□□□ -2.15
CDX2Q99626 AC010587.1-201ENST00000505809 469 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 MTND1P22-201ENST00000510572 951 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.64□□□□□ -2.15
CDX2Q99626 RNA5SP436-201ENST00000516020 115 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 RNU7-51P-201ENST00000516560 62 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.64□□□□□ -2.15
CDX2Q99626 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.64□□□□□ -2.15
CDX2Q99626 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CDX2Q99626 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.64□□□□□ -2.15
CDX2Q99626 ANP32BP3-201ENST00000559213 706 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 AC136619.2-201ENST00000563361 631 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.64□□□□□ -2.15
CDX2Q99626 MIR3913-1-201ENST00000577744 102 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.64□□□□□ -2.15
CDX2Q99626 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms