Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 AC006380.1-201ENST00000603598 186 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 AL356157.2-201ENST00000605122 111 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 AL442128.1-201ENST00000615151 90 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 AC139713.2-215ENST00000641428 5037 ntBASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CNTNAP3BQ96NU0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
CNTNAP3BQ96NU0 AL136964.1-201ENST00000622038 2990 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-324P-201ENST00000363957 106 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 SNORA7.2-201ENST00000364446 145 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-1107P-201ENST00000364817 104 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-1336P-201ENST00000383886 109 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 SNORA2.3-201ENST00000383920 135 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-756P-201ENST00000383997 107 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 SNORA51.10-201ENST00000384418 136 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-813P-201ENST00000384691 107 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 RNA5SP475-201ENST00000410568 110 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 RNA5SP31-201ENST00000411144 127 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 TOMM22P1-201ENST00000418578 312 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 AC245047.4-201ENST00000433189 144 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 AC015813.4-201ENST00000610469 179 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 MIR6867-201ENST00000610636 67 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 AC024581.2-201ENST00000619986 252 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 ZNF720P1-201ENST00000562403 1939 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 MARK2P15-201ENST00000432204 2186 ntBASIC4.46□□□□□ -1.7
CNTNAP3BQ96NU0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-647P-201ENST00000364243 107 ntBASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-454P-201ENST00000364292 107 ntBASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 SNORA73.2-201ENST00000364946 201 ntBASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 RN7SL98P-201ENST00000462271 300 ntBASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 AC091868.1-201ENST00000508746 304 ntBASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 SNORA40.13-201ENST00000516379 120 ntBASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 LINC00933-203ENST00000559812 219 ntBASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 MIR6839-201ENST00000620425 113 ntBASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 MIR6852-201ENST00000621699 66 ntBASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNTNAP3BQ96NU0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 OR14L1P-202ENST00000641545 3009 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 SNORA71.2-201ENST00000364941 134 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 Y_RNA.368-201ENST00000365547 113 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-793P-201ENST00000384233 104 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 PTMAP5-201ENST00000393073 333 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 YPEL5P1-201ENST00000419731 367 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 FTH1P6-201ENST00000430768 320 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 AP000705.1-201ENST00000454567 350 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 AC091179.3-201ENST00000474761 144 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 RNA5SP395-201ENST00000516567 118 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-703P-201ENST00000516946 107 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 AC025166.1-201ENST00000612411 163 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 AC015914.2-201ENST00000618167 288 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CNTNAP3BQ96NU0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CNTNAP3BQ96NU0 RNU6-1205P-201ENST00000363625 106 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms