Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC7Q96M83 RNU1-72P-201ENST00000362976 153 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 Y_RNA.224-201ENST00000364308 111 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 RNU6-108P-201ENST00000365558 107 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 RNU6-74P-201ENST00000384235 107 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 RNU6-843P-201ENST00000384454 104 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 SNORD116-20-201ENST00000384529 92 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 MIR1-2-201ENST00000384961 85 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 MIR524-201ENST00000385242 87 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 SNORA67.6-201ENST00000391093 99 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 AF228730.1-201ENST00000397972 663 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 RN7SKP158-201ENST00000410453 326 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC7Q96M83 CETN4P-201ENST00000432407 469 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 MTND1P26-201ENST00000440488 538 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC7Q96M83 AC244505.5-201ENST00000443639 207 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC7Q96M83 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC7Q96M83 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC7Q96M83 RNU1-86P-201ENST00000516108 154 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 RNU1-107P-201ENST00000516617 154 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC7Q96M83 PSMA3P-201ENST00000555485 635 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC7Q96M83 AC136619.2-201ENST00000563361 631 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 AC040904.1-201ENST00000590850 223 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 AL590229.1-201ENST00000603497 542 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 Z99497.2-201ENST00000603634 310 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 AC021646.1-201ENST00000605469 484 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.1□□□□□ -2.07
CCDC7Q96M83 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC7Q96M83 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CCDC7Q96M83 RNU6-1097P-201ENST00000363586 107 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 SNORA7.1-201ENST00000363750 139 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 RNU6-234P-201ENST00000365229 104 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 RNU6-456P-201ENST00000384493 107 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 MIR517C-201ENST00000385103 95 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 CYP2C59P-201ENST00000457790 269 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 AC068781.1-201ENST00000488231 618 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 MTND3P25-201ENST00000509243 135 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 MTCO3P28-201ENST00000513351 515 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.09□□□□□ -2.08
CCDC7Q96M83 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.09□□□□□ -2.08
CCDC7Q96M83 AP003072.2-201ENST00000527756 676 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 CR383656.8-201ENST00000549046 145 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.09□□□□□ -2.08
CCDC7Q96M83 AC006566.1-201ENST00000608943 513 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 RMST_6.1-201ENST00000611980 203 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 AC026585.1-201ENST00000619582 524 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 AC011155.2-201ENST00000623202 216 ntBASIC2.09□□□□□ -2.08
CCDC7Q96M83 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.09□□□□□ -2.08
CCDC7Q96M83 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC7Q96M83 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
CCDC7Q96M83 AC233981.2-201ENST00000611524 1614 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 OR4G2P-201ENST00000328113 903 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 SNORA3A-201ENST00000364113 130 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 RNA5SP240-201ENST00000365355 128 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 RNU6-282P-201ENST00000365357 103 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 SNORD116-8-201ENST00000384365 95 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 MIR454-201ENST00000390180 115 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC7Q96M83 PIGFP2-201ENST00000421400 651 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 AC133104.1-201ENST00000429100 218 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 AL365400.1-201ENST00000431854 640 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 KATNBL1P3-201ENST00000443475 909 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 AC006026.2-201ENST00000457376 180 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 AL162395.1-201ENST00000457882 422 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 RNU7-182P-201ENST00000459009 62 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC7Q96M83 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC7Q96M83 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC7Q96M83 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC7Q96M83 AL138976.2-201ENST00000563989 694 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC7Q96M83 AC015720.1-201ENST00000565251 277 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 MIR3913-1-201ENST00000577744 102 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 AC073410.2-201ENST00000603240 332 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 AC245884.12-201ENST00000615364 59 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 AL031601.2-202ENST00000622650 282 ntBASIC2.08□□□□□ -2.08
CCDC7Q96M83 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC7Q96M83 RNU6-550P-201ENST00000391057 101 ntBASIC2.07□□□□□ -2.08
CCDC7Q96M83 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC7Q96M83 RAP1BP3-201ENST00000407180 549 ntBASIC2.07□□□□□ -2.08
CCDC7Q96M83 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC7Q96M83 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC7Q96M83 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC7Q96M83 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC7Q96M83 AL161788.1-201ENST00000441805 169 ntBASIC2.07□□□□□ -2.08
CCDC7Q96M83 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC7Q96M83 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC7Q96M83 MTND2P4-201ENST00000445034 1004 ntBASIC2.07□□□□□ -2.08
CCDC7Q96M83 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC7Q96M83 RPS29P15-201ENST00000458329 171 ntBASIC2.07□□□□□ -2.08
CCDC7Q96M83 SNORA43.2-201ENST00000516652 128 ntBASIC2.07□□□□□ -2.08
CCDC7Q96M83 Y_RNA.695-201ENST00000516715 107 ntBASIC2.07□□□□□ -2.08
CCDC7Q96M83 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms