Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RNA5SP270-201ENST00000411361 118 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 Z92545.1-201ENST00000411782 234 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AC009238.1-201ENST00000442165 424 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AC009237.6-201ENST00000446969 424 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 RPS3P1-201ENST00000456781 192 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 snoU109.2-201ENST00000459316 135 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 RNU6-1208P-201ENST00000459588 107 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AC010486.1-201ENST00000511793 424 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 Y_RNA.665-201ENST00000516177 98 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AC109329.1-201ENST00000518744 317 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 CBX3P7-201ENST00000532876 502 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 CR383656.8-201ENST00000549046 145 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AC009127.3-201ENST00000570531 403 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AC073410.2-201ENST00000603240 332 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AC009233.1-201ENST00000616477 371 ntBASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.39□□□□□ -2.03
PDLIM5Q96HC4 MIR21-201ENST00000362134 72 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 Y_RNA.160-201ENST00000363677 92 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 SNORD14B-201ENST00000364533 90 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 RNU6-487P-201ENST00000365430 104 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 RNU6-434P-201ENST00000384376 107 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 MIR196B-201ENST00000384852 84 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 MIR561-201ENST00000385216 97 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 RAP1BP3-201ENST00000407180 549 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 RNU2-3P-201ENST00000410144 191 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 RNU6-607P-201ENST00000411283 108 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 RPL21P111-201ENST00000418453 477 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 IFNA11P-201ENST00000446352 526 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 MTND3P10-201ENST00000450967 341 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AC090515.1-201ENST00000465295 476 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 Y_RNA.654-201ENST00000497848 106 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 HMGN1P12-201ENST00000499125 195 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 MTND3P25-201ENST00000509243 135 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 FAM206BP-201ENST00000510179 541 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AC090115.3-201ENST00000553218 849 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AC074050.1-201ENST00000563247 211 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 MIR3126-201ENST00000577443 74 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AC021646.1-201ENST00000605469 484 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AC103705.1-201ENST00000619013 241 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AC022418.1-201ENST00000624118 445 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AC100810.6-201ENST00000638068 285 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 AC121333.1-201ENST00000567488 2709 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.38□□□□□ -2.03
PDLIM5Q96HC4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 RNU6-1010P-201ENST00000362757 107 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 RNU6-867P-201ENST00000364956 107 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 Y_RNA.373-201ENST00000365600 103 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 RNU1-57P-201ENST00000384491 166 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 POLHP1-201ENST00000411806 470 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 CYCSP33-201ENST00000414485 327 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 ARL5AP1-201ENST00000418991 388 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 AL513185.2-201ENST00000425543 193 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 PRPS1P1-201ENST00000445305 876 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 RNU7-167P-201ENST00000459160 62 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 RPL7P43-201ENST00000478876 753 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 AC083904.1-201ENST00000487828 231 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 RNU1-86P-201ENST00000516108 154 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 RNU1-107P-201ENST00000516617 154 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 RNU6-1314P-201ENST00000517139 104 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 RPS3AP23-202ENST00000574601 686 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 BNIP3P25-201ENST00000596023 559 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 Z82243.1-201ENST00000609432 473 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 MIR6817-201ENST00000615588 66 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 AC022306.2-201ENST00000617563 647 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 AC010378.1-201ENST00000619270 362 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 AL136221.1-201ENST00000621449 509 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 AC009033.1-201ENST00000624279 431 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 MIR1291-201ENST00000627649 87 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 AC069528.2-201ENST00000624849 1991 ntBASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
PDLIM5Q96HC4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PDLIM5Q96HC4 SNORD3E-201ENST00000362899 217 ntBASIC2.36□□□□□ -2.03
PDLIM5Q96HC4 SNORA3A-201ENST00000364113 130 ntBASIC2.36□□□□□ -2.03
PDLIM5Q96HC4 RNU6-1303P-201ENST00000364841 107 ntBASIC2.36□□□□□ -2.03
PDLIM5Q96HC4 RNU6-384P-201ENST00000364900 104 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms