Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC091135.1-201ENST00000585943 307 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 AL049779.4-201ENST00000604500 156 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 MIR203B-201ENST00000636080 86 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 AC099654.12-201ENST00000639868 649 ntBASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SNRNP40Q96DI7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AL354685.2-201ENST00000448218 1447 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 Y_RNA.481-201ENST00000384373 102 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 MIR29B2-201ENST00000385055 81 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 CALM2P3-201ENST00000400429 449 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AL591034.2-201ENST00000402839 359 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 TIMM9P3-201ENST00000428659 274 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 HMGN2P3-201ENST00000433603 273 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 MTND3P21-201ENST00000433774 331 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 HMGN2P5-201ENST00000436882 273 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 RPL7P54-201ENST00000438336 674 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AC007969.2-201ENST00000441891 191 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 PSPHP1-201ENST00000450062 261 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 snoU13.14-201ENST00000459372 104 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 SRRM1P2-201ENST00000464531 1192 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AC083798.1-201ENST00000472671 131 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 RPL30P1-201ENST00000488676 339 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AK3P2-201ENST00000507976 429 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 RNA5SP401-201ENST00000515920 127 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AC115990.1-201ENST00000526957 301 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AC009127.3-201ENST00000570531 403 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 MIR4446-201ENST00000578505 67 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AC123912.5-201ENST00000605470 343 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 AC139792.2-201ENST00000624218 587 ntBASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SNRNP40Q96DI7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 Y_RNA.40-201ENST00000362645 93 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 SNORD114-1-201ENST00000362705 72 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 RNU1-23P-201ENST00000363361 144 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 RNA5SP456-201ENST00000364002 114 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 RNU6-1322P-201ENST00000364309 107 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 RNA5SP210-201ENST00000391034 120 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AC096638.1-201ENST00000444678 216 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 RNU7-180P-201ENST00000459240 63 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 RPL21P99-201ENST00000480369 423 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AC019235.1-201ENST00000503847 207 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 SNORA25.17-201ENST00000517184 124 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AC245505.1-201ENST00000556398 224 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AC026271.5-201ENST00000577873 130 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 MIR5583-1-201ENST00000580941 59 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 ELOCP5-201ENST00000604924 333 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AC103810.6-201ENST00000606708 136 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 AC241585.2-209ENST00000638217 143 ntBASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SNRNP40Q96DI7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 RNU6-428P-201ENST00000362942 107 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 RNU6-1085P-201ENST00000363576 107 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 Y_RNA.409-201ENST00000383990 98 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 RNA5SP219-201ENST00000390940 113 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 RNU6-482P-201ENST00000391068 107 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 RNU2-32P-201ENST00000411193 191 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 EDDM3CP-201ENST00000415977 425 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 RNU6-261P-201ENST00000459506 102 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 TBCAP3-201ENST00000512475 312 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 RNU7-193P-201ENST00000516723 65 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 AC004486.1-201ENST00000546846 233 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 MIR4424-201ENST00000585257 86 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 APOOP1-201ENST00000604695 592 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 RNU6-85P-201ENST00000605989 107 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 AC092954.2-201ENST00000609103 430 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 AC012640.5-201ENST00000623897 319 ntBASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.18□□□□□ -2.06
SNRNP40Q96DI7 RNU6-336P-201ENST00000364891 107 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 RNU6-827P-201ENST00000365553 106 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 RNU6-546P-201ENST00000383991 107 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms