Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 GSTA11P-201ENST00000452866 669 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 RN7SL442P-201ENST00000473804 320 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AL590705.4-201ENST00000532209 134 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AC025281.1-201ENST00000567026 265 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AL138825.1-201ENST00000618587 192 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 Y_RNA.80-201ENST00000362996 102 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 Y_RNA.459-201ENST00000384251 102 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 Y_RNA.496-201ENST00000384444 101 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 MIR544A-201ENST00000384855 91 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 Y_RNA.605-201ENST00000410577 105 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 AC096649.2-201ENST00000416186 393 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 MRPS18CP6-201ENST00000423587 223 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 AC007969.2-201ENST00000441891 191 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 AL513124.1-201ENST00000450410 614 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 HMGN1P10-201ENST00000474557 553 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 RPS26P21-201ENST00000475397 348 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 AC109925.1-201ENST00000478069 331 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 AC104564.1-201ENST00000493028 407 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 AC105758.1-201ENST00000506038 399 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 SNORA64.4-201ENST00000516632 81 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 SNORA31.23-201ENST00000517219 133 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 AC004584.2-201ENST00000570407 410 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 uc_338.25-201ENST00000613756 156 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 AC091903.1-201ENST00000624322 454 ntBASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.98□□□□□ -1.93
CTHRC1Q96CG8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AC005592.1-201ENST00000566527 1640 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AC233981.2-201ENST00000611524 1614 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 MTND5P27-201ENST00000428871 1720 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 RNA5SP383-201ENST00000362934 120 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 RNU1-105P-201ENST00000363470 161 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 RNU1-140P-201ENST00000365040 165 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 RNU6-487P-201ENST00000365430 104 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 MIR491-201ENST00000384877 84 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 RNU2-49P-201ENST00000410666 184 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AC092423.1-201ENST00000430165 186 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 RPL23AP22-201ENST00000437556 453 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AL031659.1-201ENST00000447075 539 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AC079354.2-201ENST00000453523 154 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 RPL30P10-201ENST00000488148 337 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 RNU7-175P-201ENST00000515915 61 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 RNU6-475P-201ENST00000516073 104 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 RNU5B-3P-201ENST00000516601 115 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 SNORD59.2-201ENST00000516873 68 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 Y_RNA.720-201ENST00000517166 92 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 SNORA70.24-201ENST00000517233 118 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 CKS1BP7-201ENST00000522230 235 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 MIR5680-201ENST00000577577 84 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 MIR5701-3-201ENST00000578890 82 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 MIR5701-1-201ENST00000585138 82 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AC091152.3-201ENST00000604227 325 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 MIR5701-2-201ENST00000615634 82 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AL606534.2-204ENST00000635008 178 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 AC010889.1-201ENST00000566193 2666 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 MAPK10-362ENST00000641864 4484 ntBASIC2.97□□□□□ -1.93
CTHRC1Q96CG8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 SNORD56.3-201ENST00000363507 71 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 SNORA14A-201ENST00000364773 135 ntBASIC2.96□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.424-201ENST00000384063 103 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms