Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC012065.4-201ENST00000602445 679 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.39□□□□□ -2.35
TTC28Q96AY4 AL121890.5-201ENST00000620848 304 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.39□□□□□ -2.35
TTC28Q96AY4 MIR4320-201ENST00000636981 65 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.39□□□□□ -2.35
TTC28Q96AY4 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 SNORA4.1-201ENST00000364263 144 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 RNU6-160P-201ENST00000384591 107 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 RPS27P16-201ENST00000425758 201 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 PTGES3P4-201ENST00000426243 356 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 MTATP6P30-201ENST00000443540 664 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 AP001324.2-201ENST00000461163 319 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC011406.1-201ENST00000512440 370 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 PTP4A1P4-201ENST00000512479 322 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 RNU6-678P-201ENST00000516832 109 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.38□□□□□ -2.35
TTC28Q96AY4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC005832.3-201ENST00000537929 631 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC006518.2-201ENST00000542513 940 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC004584.2-201ENST00000570407 410 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 MIR4666A-201ENST00000580160 79 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC121334.2-201ENST00000605387 271 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 AL133445.2-201ENST00000611191 527 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC087821.2-201ENST00000637086 450 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 RNU6-1167P-201ENST00000363227 94 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 RNU6-833P-201ENST00000363486 107 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 Y_RNA.346-201ENST00000365385 112 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 RNU6-25P-201ENST00000383873 107 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 SNORD14D-201ENST00000384390 87 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 RNU6-29P-201ENST00000384637 107 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
TTC28Q96AY4 PIGPP2-201ENST00000411569 458 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 MTCO2P8-201ENST00000412213 658 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 MRPL35P3-201ENST00000421557 364 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 UBE2V2P3-201ENST00000433562 437 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 BRK1P2-201ENST00000442875 223 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.38□□□□□ -2.35
TTC28Q96AY4 RNU6-927P-201ENST00000516199 100 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 RNU6-965P-201ENST00000516721 96 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
TTC28Q96AY4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.38□□□□□ -2.35
TTC28Q96AY4 CYP3A52P-201ENST00000563326 91 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC090615.1-201ENST00000577519 154 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.38□□□□□ -2.35
TTC28Q96AY4 AC012676.2-201ENST00000619258 186 ntBASIC0.38□□□□□ -2.35
TTC28Q96AY4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
TTC28Q96AY4 SNORD33-201ENST00000362761 85 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNU6-223P-201ENST00000362830 107 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNU6-414P-201ENST00000363705 104 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNA5SP493-201ENST00000364115 91 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 Y_RNA.231-201ENST00000364358 102 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNU6-26P-201ENST00000383985 107 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 Y_RNA.533-201ENST00000384596 114 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 MIR618-201ENST00000385287 98 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 MIR1267-201ENST00000408723 78 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC245047.4-201ENST00000433189 144 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 GTF2IP13-201ENST00000438487 386 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 snoU13.9-201ENST00000458927 103 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNU7-59P-201ENST00000459101 61 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNU6-775P-201ENST00000459318 96 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 SNORD124-201ENST00000459577 104 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RPS26P55-201ENST00000471178 356 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 SNORD116-28-201ENST00000516123 91 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNU6-703P-201ENST00000516946 107 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.37□□□□□ -2.35
TTC28Q96AY4 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AP001485.1-201ENST00000604799 199 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC107952.2-201ENST00000606048 486 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 Z82243.1-201ENST00000609432 473 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC004908.3-201ENST00000610248 625 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AL138726.1-201ENST00000614873 333 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.37□□□□□ -2.35
TTC28Q96AY4 MIR6134-201ENST00000617606 109 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 uc_338.17-201ENST00000619633 179 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AL445264.1-201ENST00000621719 171 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC017037.3-201ENST00000625016 472 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
TTC28Q96AY4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNU6-1128P-201ENST00000362825 109 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNU6-216P-201ENST00000363282 104 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNU1-124P-201ENST00000363861 145 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 Y_RNA.180-201ENST00000363867 113 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNU6-650P-201ENST00000365658 111 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RNU6-952P-201ENST00000391164 108 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 RPS26P42-201ENST00000413485 326 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AL353621.1-201ENST00000418219 243 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 MTCO2P5-201ENST00000422621 426 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 SKA2P1-201ENST00000425592 390 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC010153.1-201ENST00000432862 727 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms