Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AC011921.3-201ENST00000605540 361 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.68
VTI1AQ96AJ9 AC022336.2-201ENST00000568966 2538 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 RNA5SP124-201ENST00000362739 110 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 RNU6-47P-201ENST00000383866 107 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 RNU6-20P-201ENST00000384106 107 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 Y_RNA.446-201ENST00000384178 104 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 RNU6-1145P-201ENST00000384246 107 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 RNU6-378P-201ENST00000384324 107 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 RNU6-21P-201ENST00000384710 107 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 MIR93-201ENST00000385024 80 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 U3.19-201ENST00000390893 196 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 SNORA57.3-201ENST00000411095 141 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 snoU13.6-201ENST00000458785 104 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 AC074198.2-201ENST00000508153 258 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 RNU6-581P-201ENST00000516214 105 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 RNU6-928P-201ENST00000516876 104 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 AL391261.3-201ENST00000557194 520 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 AC015813.4-201ENST00000610469 179 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VTI1AQ96AJ9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 RNU6-270P-201ENST00000364131 105 ntBASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 Y_RNA.292-201ENST00000364904 97 ntBASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 NDUFS5P4-201ENST00000412983 318 ntBASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 NDUFB4P10-201ENST00000452541 359 ntBASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 AP000705.1-201ENST00000454567 350 ntBASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 AP001025.1-201ENST00000486139 332 ntBASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 RNU6-861P-201ENST00000516745 106 ntBASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 AC022559.1-201ENST00000520905 205 ntBASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 AC025627.2-201ENST00000576220 160 ntBASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 SNORA51-201ENST00000606420 132 ntBASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 AP001486.2-201ENST00000561652 5113 ntBASIC4.57□□□□□ -1.68
VTI1AQ96AJ9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 SNORA60-201ENST00000362396 134 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 RNU6-137P-201ENST00000363680 108 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 RNU6-1141P-201ENST00000364520 107 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 Y_RNA.275-201ENST00000364726 110 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 RNU6-213P-201ENST00000384051 104 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 RNU6-125P-201ENST00000384505 107 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 RPL21P17-201ENST00000397467 475 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 RN7SKP156-201ENST00000410308 342 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 AC093578.1-201ENST00000415219 368 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 HMGN2P20-201ENST00000437531 273 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 AC117440.1-201ENST00000474107 571 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 KLKP1-201ENST00000595979 403 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 Z83818.1-201ENST00000603584 150 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 AC037487.3-201ENST00000606668 112 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 MIR6868-201ENST00000611215 58 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 AC019176.2-201ENST00000611579 315 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 AL357075.2-201ENST00000614906 189 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 AC084757.4-201ENST00000616350 526 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 MIR6076-201ENST00000617521 113 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 AC012314.7-201ENST00000619693 93 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 MAPK10-373ENST00000641983 6772 ntBASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.56□□□□□ -1.68
VTI1AQ96AJ9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 SNORA73.2-201ENST00000364946 201 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 RNU6-1175P-201ENST00000365200 107 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 RNU6-1280P-201ENST00000365211 107 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 Y_RNA.418-201ENST00000384029 102 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 RN7SKP61-201ENST00000410642 295 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 AL353748.1-201ENST00000440753 474 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 RPL23AP3-201ENST00000453844 468 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 COX6CP14-201ENST00000469580 174 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 AC084357.1-201ENST00000473404 255 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 RPL32P34-201ENST00000486380 400 ntBASIC4.55□□□□□ -1.68
VTI1AQ96AJ9 RN7SL323P-201ENST00000494712 295 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms