Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.33□□□□□ -1.88
HPS3Q969F9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.33□□□□□ -1.88
HPS3Q969F9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HPS3Q969F9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HPS3Q969F9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.32□□□□□ -1.88
HPS3Q969F9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.32□□□□□ -1.88
HPS3Q969F9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.32□□□□□ -1.88
HPS3Q969F9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HPS3Q969F9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.32□□□□□ -1.88
HPS3Q969F9 RNU1-140P-201ENST00000365040 165 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 MIR544A-201ENST00000384855 91 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 AL031121.1-201ENST00000406553 254 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 RN7SKP220-201ENST00000410611 288 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 AC004383.1-201ENST00000438135 289 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 FTH1P25-201ENST00000447665 469 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 RPL30P15-201ENST00000457129 321 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 RPL27AP5-201ENST00000469428 449 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 AP001025.1-201ENST00000486139 332 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 Y_RNA.670-201ENST00000516255 105 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 HPRT1P3-201ENST00000539521 576 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.32□□□□□ -1.88
HPS3Q969F9 AC109446.1-201ENST00000566172 220 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 AC090897.2-201ENST00000581715 130 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 AC005899.2-201ENST00000584353 90 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 AC011494.1-201ENST00000596454 237 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.32□□□□□ -1.88
HPS3Q969F9 AC007792.1-201ENST00000623023 402 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 AC006026.1-201ENST00000444025 1803 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.32□□□□□ -1.88
HPS3Q969F9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.32□□□□□ -1.88
HPS3Q969F9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.32□□□□□ -1.88
HPS3Q969F9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HPS3Q969F9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HPS3Q969F9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HPS3Q969F9 AP003122.5-201ENST00000527668 3766 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 RNU6-622P-201ENST00000384272 103 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 Y_RNA.500-201ENST00000384466 111 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 RNU6-692P-201ENST00000384496 107 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 UBA52P6-201ENST00000399822 382 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 RNU6-1304P-201ENST00000411374 106 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.31□□□□□ -1.88
HPS3Q969F9 AL049873.1-201ENST00000480540 376 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 MRPS36P2-201ENST00000512569 299 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.31□□□□□ -1.88
HPS3Q969F9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.31□□□□□ -1.88
HPS3Q969F9 RPS15AP11-201ENST00000594193 385 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 AC008739.2-201ENST00000597006 317 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 AL133255.1-201ENST00000606374 441 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 AL050343.2-201ENST00000607338 280 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 AL162274.2-201ENST00000614406 332 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 AC002064.3-201ENST00000623448 346 ntBASIC3.31□□□□□ -1.88
HPS3Q969F9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HPS3Q969F9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HPS3Q969F9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HPS3Q969F9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HPS3Q969F9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.31□□□□□ -1.88
HPS3Q969F9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HPS3Q969F9 AC009541.1-201ENST00000438279 2662 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HPS3Q969F9 SNORD114-19-201ENST00000363072 75 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 SNORD116-29-201ENST00000384516 83 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 RNU6-1222P-201ENST00000384615 107 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HPS3Q969F9 AL591034.2-201ENST00000402839 359 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 AL133475.1-201ENST00000404414 305 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 USMG5P1-201ENST00000425964 177 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 AC104332.2-201ENST00000429959 156 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.3□□□□□ -1.88
HPS3Q969F9 AP001324.2-201ENST00000461163 319 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 RPL31P41-201ENST00000477967 372 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 RN7SL633P-201ENST00000488974 297 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 RPL22P13-201ENST00000493291 347 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.3□□□□□ -1.88
HPS3Q969F9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.3□□□□□ -1.88
HPS3Q969F9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.3□□□□□ -1.88
HPS3Q969F9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.3□□□□□ -1.88
HPS3Q969F9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.3□□□□□ -1.88
HPS3Q969F9 MIR4506-201ENST00000584693 77 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.3□□□□□ -1.88
HPS3Q969F9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.3□□□□□ -1.88
HPS3Q969F9 RPL23AP78-201ENST00000599928 470 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 AL160413.1-201ENST00000622780 310 ntBASIC3.3□□□□□ -1.88
HPS3Q969F9 AC002543.1-201ENST00000299783 1954 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.29□□□□□ -1.88
HPS3Q969F9 RNU6-1059P-201ENST00000363752 98 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 Y_RNA.473-201ENST00000384333 102 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.29□□□□□ -1.88
HPS3Q969F9 RPL39P29-201ENST00000447779 157 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 AP001486.1-201ENST00000463339 476 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 RPS29P27-201ENST00000463711 170 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 RPL7P42-201ENST00000481005 679 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS3Q969F9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS3Q969F9 SEM1P1-201ENST00000506694 209 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 AC097473.1-201ENST00000508142 408 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 RNU6-1170P-201ENST00000515974 106 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS3Q969F9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms