Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RNA5SP24-201ENST00000516478 95 ntBASIC2.09□□□□□ -2.07
PTP4A1Q93096 SNORA25.17-201ENST00000517184 124 ntBASIC2.09□□□□□ -2.07
PTP4A1Q93096 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.09□□□□□ -2.07
PTP4A1Q93096 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.09□□□□□ -2.07
PTP4A1Q93096 AGGF1P4-201ENST00000568249 801 ntBASIC2.09□□□□□ -2.07
PTP4A1Q93096 AC008752.3-201ENST00000588113 712 ntBASIC2.09□□□□□ -2.07
PTP4A1Q93096 AC006023.1-201ENST00000603944 259 ntBASIC2.09□□□□□ -2.07
PTP4A1Q93096 AC002044.1-201ENST00000606707 158 ntBASIC2.09□□□□□ -2.07
PTP4A1Q93096 AL022345.1-201ENST00000607292 135 ntBASIC2.09□□□□□ -2.07
PTP4A1Q93096 SNORD98-201ENST00000636377 67 ntBASIC2.09□□□□□ -2.07
PTP4A1Q93096 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PTP4A1Q93096 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.09□□□□□ -2.08
PTP4A1Q93096 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PTP4A1Q93096 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PTP4A1Q93096 Y_RNA.99-201ENST00000363138 105 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 RNU6-996P-201ENST00000365438 107 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.08□□□□□ -2.08
PTP4A1Q93096 RNU11-3P-201ENST00000391111 133 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 RNA5SP212-201ENST00000391223 107 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 RPS29P13-201ENST00000402041 169 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.08□□□□□ -2.08
PTP4A1Q93096 SRIP2-201ENST00000428470 166 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.08□□□□□ -2.08
PTP4A1Q93096 AC002486.1-201ENST00000435098 391 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 AL031667.1-201ENST00000440222 725 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.08□□□□□ -2.08
PTP4A1Q93096 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.08□□□□□ -2.08
PTP4A1Q93096 AP005435.4-201ENST00000529514 284 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.08□□□□□ -2.08
PTP4A1Q93096 HIF1AP1-201ENST00000553642 175 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.08□□□□□ -2.08
PTP4A1Q93096 AC046143.2-201ENST00000609789 160 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.08□□□□□ -2.08
PTP4A1Q93096 AC136475.10-201ENST00000620253 385 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 AL160394.1-201ENST00000624765 724 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PTP4A1Q93096 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
PTP4A1Q93096 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
PTP4A1Q93096 KPNA2P1-201ENST00000458289 1591 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 AC092268.1-201ENST00000342691 405 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PTP4A1Q93096 Y_RNA.111-201ENST00000363248 100 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 RNU6-1103P-201ENST00000384150 107 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 RNU6-43P-201ENST00000384302 107 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PTP4A1Q93096 RPL17P50-201ENST00000396131 546 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 AL591416.1-201ENST00000404015 867 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 MIR1262-201ENST00000408276 93 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 POLHP1-201ENST00000411806 470 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PTP4A1Q93096 AL117339.3-201ENST00000418733 162 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 AC010975.2-201ENST00000427781 588 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.07□□□□□ -2.08
PTP4A1Q93096 RPS15AP28-201ENST00000435088 386 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 AC018634.1-201ENST00000437554 401 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.07□□□□□ -2.08
PTP4A1Q93096 HMGB1P29-201ENST00000505659 499 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.07□□□□□ -2.08
PTP4A1Q93096 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.07□□□□□ -2.08
PTP4A1Q93096 MTND4P7-201ENST00000523876 130 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 MTATP6P3-201ENST00000581686 676 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 AC002984.1-201ENST00000591692 448 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 APOOP1-201ENST00000604695 592 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 AC123912.5-201ENST00000605470 343 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 AC103810.6-201ENST00000606708 136 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PTP4A1Q93096 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PTP4A1Q93096 AC241585.2-209ENST00000638217 143 ntBASIC2.07□□□□□ -2.08
PTP4A1Q93096 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
PTP4A1Q93096 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
PTP4A1Q93096 AC009487.4-201ENST00000624969 3585 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 RNU1-58P-201ENST00000362413 163 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 RNU6-428P-201ENST00000362942 107 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 RNU6-1042P-201ENST00000384204 107 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 RN7SKP61-201ENST00000410642 295 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.06□□□□□ -2.08
PTP4A1Q93096 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.06□□□□□ -2.08
PTP4A1Q93096 AC244636.1-201ENST00000421152 228 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 AL139413.1-201ENST00000421309 217 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 AL590135.1-201ENST00000422215 156 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 AC019205.3-201ENST00000424573 156 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 VN1R108P-201ENST00000431580 830 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.06□□□□□ -2.08
PTP4A1Q93096 AC016700.2-201ENST00000446011 156 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 RPL31P3-201ENST00000458430 332 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 RNU6-333P-201ENST00000459117 107 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 AC015911.1-201ENST00000495111 156 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 AC016632.1-201ENST00000503994 196 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 AC093259.1-201ENST00000509755 300 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 RNU6-567P-201ENST00000516746 107 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.06□□□□□ -2.08
PTP4A1Q93096 AC021269.2-201ENST00000532318 330 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 HSPE1P4-201ENST00000550617 308 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 MIR5007-201ENST00000583098 95 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 AC012507.3-201ENST00000603556 477 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 MIR6766-201ENST00000622641 72 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms