Protein–RNA interactions for Protein: Q92954

PRG4, Proteoglycan 4, humanhuman

Predicted RBP Predictions only

Length 1,404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4Q92954 SNRPEP3-201ENST00000338402 276 ntBASIC0.47□□□□□ -2.33
PRG4Q92954 RNU6-655P-201ENST00000362858 107 ntBASIC0.47□□□□□ -2.33
PRG4Q92954 RNU6-944P-201ENST00000364023 107 ntBASIC0.47□□□□□ -2.33
PRG4Q92954 MIR520A-201ENST00000384862 85 ntBASIC0.47□□□□□ -2.33
PRG4Q92954 MIR29B2-201ENST00000385055 81 ntBASIC0.47□□□□□ -2.33
PRG4Q92954 TIMM9P1-201ENST00000436122 256 ntBASIC0.47□□□□□ -2.33
PRG4Q92954 AC130509.1-201ENST00000464158 433 ntBASIC0.47□□□□□ -2.33
PRG4Q92954 RNU6-197P-201ENST00000516680 100 ntBASIC0.47□□□□□ -2.33
PRG4Q92954 RNU6-1261P-201ENST00000517194 104 ntBASIC0.47□□□□□ -2.33
PRG4Q92954 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.47□□□□□ -2.33
PRG4Q92954 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.47□□□□□ -2.33
PRG4Q92954 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.47□□□□□ -2.33
PRG4Q92954 MIR5190-201ENST00000581537 80 ntBASIC0.47□□□□□ -2.33
PRG4Q92954 AL590240.4-201ENST00000616908 390 ntBASIC0.47□□□□□ -2.33
PRG4Q92954 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.47□□□□□ -2.33
PRG4Q92954 RNU6-858P-201ENST00000362436 107 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 DHFRP6-201ENST00000401776 268 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 AC010099.3-201ENST00000423896 409 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 AC104651.1-201ENST00000427559 735 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.46□□□□□ -2.34
PRG4Q92954 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.46□□□□□ -2.34
PRG4Q92954 RNU6-333P-201ENST00000459117 107 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 RNU7-140P-201ENST00000459546 60 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 TRBVB-201ENST00000477100 408 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 AC114981.1-201ENST00000503897 678 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 RNU6-143P-201ENST00000516942 93 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 RNA5SP503-201ENST00000517047 117 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.46□□□□□ -2.34
PRG4Q92954 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.46□□□□□ -2.34
PRG4Q92954 AP001189.2-201ENST00000527320 189 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 AC093012.1-202ENST00000549403 582 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.46□□□□□ -2.34
PRG4Q92954 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.46□□□□□ -2.34
PRG4Q92954 AC008751.2-201ENST00000597885 980 ntBASIC0.46□□□□□ -2.34
PRG4Q92954 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.46□□□□□ -2.34
PRG4Q92954 SNORD114-6-201ENST00000364393 72 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 Y_RNA.390-201ENST00000383932 102 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 RNU6-549P-201ENST00000384433 107 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 RNU6-114P-201ENST00000384704 105 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 MIR19B1-201ENST00000384829 87 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
PRG4Q92954 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
PRG4Q92954 BX119904.4-201ENST00000424402 301 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 MTND4LP14-201ENST00000429447 288 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.45□□□□□ -2.34
PRG4Q92954 AC004854.1-201ENST00000440356 349 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 MTND2P4-201ENST00000445034 1004 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 MTND1P16-201ENST00000465177 898 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 SNORA3.4-201ENST00000515969 96 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 RNU5A-4P-201ENST00000516588 111 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.45□□□□□ -2.34
PRG4Q92954 AC090142.3-201ENST00000519012 385 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 MIR3664-201ENST00000579074 99 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.45□□□□□ -2.34
PRG4Q92954 AL365204.3-201ENST00000612448 685 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 AC007792.1-201ENST00000623023 402 ntBASIC0.45□□□□□ -2.34
PRG4Q92954 CBX3P9-201ENST00000402326 552 ntBASIC0.44□□□□□ -2.34
PRG4Q92954 MRPS36P1-201ENST00000421291 307 ntBASIC0.44□□□□□ -2.34
PRG4Q92954 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
PRG4Q92954 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.44□□□□□ -2.34
PRG4Q92954 PDCD5P2-201ENST00000507570 312 ntBASIC0.44□□□□□ -2.34
PRG4Q92954 RNA5SP481-201ENST00000516814 122 ntBASIC0.44□□□□□ -2.34
PRG4Q92954 RN7SKP258-201ENST00000517151 304 ntBASIC0.44□□□□□ -2.34
PRG4Q92954 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.44□□□□□ -2.34
PRG4Q92954 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.44□□□□□ -2.34
PRG4Q92954 BNIP3P16-201ENST00000589779 534 ntBASIC0.44□□□□□ -2.34
PRG4Q92954 AC068790.6-201ENST00000602558 258 ntBASIC0.44□□□□□ -2.34
PRG4Q92954 AC008759.3-201ENST00000613300 508 ntBASIC0.44□□□□□ -2.34
PRG4Q92954 AL357080.1-201ENST00000617394 239 ntBASIC0.44□□□□□ -2.34
PRG4Q92954 AC120349.3-201ENST00000624377 529 ntBASIC0.44□□□□□ -2.34
PRG4Q92954 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.44□□□□□ -2.34
PRG4Q92954 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.43□□□□□ -2.34
PRG4Q92954 RNU6-188P-201ENST00000364207 107 ntBASIC0.43□□□□□ -2.34
PRG4Q92954 TPMTP2-201ENST00000414372 726 ntBASIC0.43□□□□□ -2.34
PRG4Q92954 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.43□□□□□ -2.34
PRG4Q92954 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
PRG4Q92954 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.43□□□□□ -2.34
PRG4Q92954 VN1R82P-201ENST00000601481 356 ntBASIC0.43□□□□□ -2.34
PRG4Q92954 BNIP3P31-201ENST00000604515 566 ntBASIC0.43□□□□□ -2.34
PRG4Q92954 AC090578.1-201ENST00000604955 591 ntBASIC0.43□□□□□ -2.34
PRG4Q92954 MIR1248-201ENST00000629190 106 ntBASIC0.43□□□□□ -2.34
PRG4Q92954 MIR3529-201ENST00000637713 78 ntBASIC0.43□□□□□ -2.34
PRG4Q92954 RNU6-216P-201ENST00000363282 104 ntBASIC0.42□□□□□ -2.34
PRG4Q92954 RNU6-1210P-201ENST00000363775 107 ntBASIC0.42□□□□□ -2.34
PRG4Q92954 RNU6-353P-201ENST00000364266 108 ntBASIC0.42□□□□□ -2.34
PRG4Q92954 RNU6-1207P-201ENST00000384343 107 ntBASIC0.42□□□□□ -2.34
PRG4Q92954 AC114482.1-201ENST00000418010 247 ntBASIC0.42□□□□□ -2.34
PRG4Q92954 RPS25P9-201ENST00000435591 252 ntBASIC0.42□□□□□ -2.34
PRG4Q92954 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.42□□□□□ -2.34
PRG4Q92954 RPS27AP8-201ENST00000452665 445 ntBASIC0.42□□□□□ -2.34
PRG4Q92954 AC010631.1-201ENST00000474150 156 ntBASIC0.42□□□□□ -2.34
PRG4Q92954 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.42□□□□□ -2.34
PRG4Q92954 RNU6-572P-201ENST00000516724 80 ntBASIC0.42□□□□□ -2.34
PRG4Q92954 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.42□□□□□ -2.34
PRG4Q92954 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.42□□□□□ -2.34
PRG4Q92954 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.42□□□□□ -2.34
PRG4Q92954 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.42□□□□□ -2.34
PRG4Q92954 MIR4666A-201ENST00000580160 79 ntBASIC0.42□□□□□ -2.34
PRG4Q92954 uc_338.17-201ENST00000619633 179 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms