Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ERCC4Q92889 RNU6-884P-201ENST00000363889 107 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 RNU6-450P-201ENST00000364654 107 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 RNU6-898P-201ENST00000365627 104 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.67□□□□□ -1.82
ERCC4Q92889 MIR625-201ENST00000385047 85 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 RNU6-1109P-201ENST00000391187 107 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 MIR1252-201ENST00000408861 65 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 RNU6-101P-201ENST00000410323 104 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 AP000275.1-201ENST00000411943 390 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 NDUFS5P4-201ENST00000412983 318 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.67□□□□□ -1.82
ERCC4Q92889 RPL37P4-201ENST00000448908 268 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.67□□□□□ -1.82
ERCC4Q92889 RPL30P14-201ENST00000482744 348 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 RPL32P34-201ENST00000486380 400 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 RN7SL283P-201ENST00000489055 303 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 RPS27AP10-201ENST00000496103 208 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 AC093663.1-201ENST00000497190 394 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 FCF1P8-201ENST00000510322 597 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.67□□□□□ -1.82
ERCC4Q92889 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.67□□□□□ -1.82
ERCC4Q92889 SNORA31.18-201ENST00000517043 134 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 HSBP1P1-201ENST00000555205 166 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 MIR3944-201ENST00000581277 108 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.67□□□□□ -1.82
ERCC4Q92889 AC006111.3-201ENST00000622137 383 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 AC091903.1-201ENST00000624322 454 ntBASIC3.67□□□□□ -1.82
ERCC4Q92889 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ERCC4Q92889 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ERCC4Q92889 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ERCC4Q92889 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ERCC4Q92889 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ERCC4Q92889 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ERCC4Q92889 Y_RNA.401-201ENST00000383965 117 ntBASIC3.66□□□□□ -1.82
ERCC4Q92889 DPH3P2-201ENST00000422618 250 ntBASIC3.66□□□□□ -1.82
ERCC4Q92889 RPL21P40-201ENST00000428586 483 ntBASIC3.66□□□□□ -1.82
ERCC4Q92889 RNU6-911P-201ENST00000516523 104 ntBASIC3.66□□□□□ -1.82
ERCC4Q92889 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.66□□□□□ -1.82
ERCC4Q92889 HIGD1AP1-201ENST00000550979 275 ntBASIC3.66□□□□□ -1.82
ERCC4Q92889 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.66□□□□□ -1.82
ERCC4Q92889 VN1R91P-201ENST00000594377 169 ntBASIC3.66□□□□□ -1.82
ERCC4Q92889 AC006006.1-201ENST00000603082 144 ntBASIC3.66□□□□□ -1.82
ERCC4Q92889 AC006557.5-201ENST00000603126 811 ntBASIC3.66□□□□□ -1.82
ERCC4Q92889 7SK.7-201ENST00000603504 247 ntBASIC3.66□□□□□ -1.82
ERCC4Q92889 AC024220.1-201ENST00000603675 484 ntBASIC3.66□□□□□ -1.82
ERCC4Q92889 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.66□□□□□ -1.82
ERCC4Q92889 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ERCC4Q92889 AC103988.1-201ENST00000566382 2177 ntBASIC3.65□□□□□ -1.82
ERCC4Q92889 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
ERCC4Q92889 SNORD14.1-201ENST00000365609 90 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 RNU6-26P-201ENST00000383985 107 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 Y_RNA.424-201ENST00000384063 103 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 MT-TG-201ENST00000387429 68 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
ERCC4Q92889 RNU6-1077P-201ENST00000410506 102 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 RN7SKP123-201ENST00000410732 291 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.65□□□□□ -1.83
ERCC4Q92889 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
ERCC4Q92889 RPL32P35-201ENST00000415214 394 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.65□□□□□ -1.83
ERCC4Q92889 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ERCC4Q92889 AC006026.2-201ENST00000457376 180 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 RPL22P13-201ENST00000493291 347 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 RNU6-635P-201ENST00000516651 102 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 Y_RNA.715-201ENST00000517082 110 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.65□□□□□ -1.83
ERCC4Q92889 AC124312.5-201ENST00000604451 268 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 MIR1244-1-201ENST00000612829 85 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 AC084757.4-201ENST00000616350 526 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 MIR1244-3-201ENST00000635744 85 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 MIR1244-2-201ENST00000636449 85 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 MIR1244-4-202ENST00000636813 85 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 AL049781.1-201ENST00000623195 3585 ntBASIC3.65□□□□□ -1.83
ERCC4Q92889 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.65□□□□□ -1.83
ERCC4Q92889 RNU6-874P-201ENST00000362390 105 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 RNY3P11-201ENST00000364153 102 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 RNU1-100P-201ENST00000365255 165 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 MIR1302-3-201ENST00000408128 138 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 RNA5SP494-201ENST00000410653 129 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.64□□□□□ -1.83
ERCC4Q92889 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.64□□□□□ -1.83
ERCC4Q92889 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ERCC4Q92889 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.64□□□□□ -1.83
ERCC4Q92889 AC073910.1-201ENST00000445047 438 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.64□□□□□ -1.83
ERCC4Q92889 RN7SL293P-201ENST00000481765 281 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 MRPS35P2-201ENST00000508242 191 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 AC144568.1-201ENST00000520139 137 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.64□□□□□ -1.83
ERCC4Q92889 AC040926.1-201ENST00000530195 238 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 AP002404.1-201ENST00000532005 451 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.64□□□□□ -1.83
ERCC4Q92889 AL161670.1-201ENST00000554348 137 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.64□□□□□ -1.83
ERCC4Q92889 AC078899.3-201ENST00000599065 212 ntBASIC3.64□□□□□ -1.83
ERCC4Q92889 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.64□□□□□ -1.83
ERCC4Q92889 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ERCC4Q92889 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
ERCC4Q92889 FAM35BP-202ENST00000497389 3337 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms