Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 HMGN1P28-201ENST00000521340 364 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SNED1Q8TER0 AC093012.1-202ENST00000549403 582 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 AC024619.4-201ENST00000580924 316 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 MIR5583-1-201ENST00000580941 59 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 AC100830.2-201ENST00000581636 240 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 MIR3609-201ENST00000582661 80 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 MIR3672-201ENST00000584290 82 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 AP000942.3-201ENST00000603702 160 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 AL645944.1-201ENST00000603857 493 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.72□□□□□ -1.97
SNED1Q8TER0 AL132822.1-201ENST00000617063 513 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 7SK.10-201ENST00000621414 298 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 uc_338.22-201ENST00000622722 187 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 AC244517.12-201ENST00000623581 663 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 AC138305.3-201ENST00000624988 240 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.72□□□□□ -1.97
SNED1Q8TER0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.72□□□□□ -1.97
SNED1Q8TER0 API5P2-201ENST00000397055 1498 ntBASIC2.71□□□□□ -1.97
SNED1Q8TER0 OR4G2P-202ENST00000641004 1759 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 RNU6-82P-201ENST00000363970 107 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 RNU6-960P-201ENST00000364056 120 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 SNORA25.6-201ENST00000364121 118 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 RNU6-61P-201ENST00000365528 109 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 RNU6-1197P-201ENST00000391183 107 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.71□□□□□ -1.98
SNED1Q8TER0 RNU2-43P-201ENST00000410306 190 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.71□□□□□ -1.98
SNED1Q8TER0 AC113618.1-201ENST00000416747 285 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 AL139396.1-201ENST00000421137 167 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 PMCHL1-202ENST00000423102 261 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.71□□□□□ -1.98
SNED1Q8TER0 IPO7P1-201ENST00000442031 636 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SNED1Q8TER0 RPL30P15-201ENST00000457129 321 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 Y_RNA.653-201ENST00000459091 95 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 RPL7P43-201ENST00000478876 753 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 CCDC34P1-201ENST00000507441 517 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.71□□□□□ -1.98
SNED1Q8TER0 SMURF2P1-201ENST00000514992 481 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 RNU6-256P-201ENST00000516747 97 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 RNA5SP454-201ENST00000517231 127 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.71□□□□□ -1.98
SNED1Q8TER0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.71□□□□□ -1.98
SNED1Q8TER0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.71□□□□□ -1.98
SNED1Q8TER0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.71□□□□□ -1.98
SNED1Q8TER0 BNIP3P25-201ENST00000596023 559 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 RPL23AP78-201ENST00000599928 470 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 AC092747.3-201ENST00000603769 301 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 AC022893.3-201ENST00000607665 437 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 AP001486.3-201ENST00000615334 372 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SNED1Q8TER0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.71□□□□□ -1.98
SNED1Q8TER0 AC009812.4-201ENST00000569134 1805 ntBASIC2.71□□□□□ -1.98
SNED1Q8TER0 AC121333.1-201ENST00000567488 2709 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
SNED1Q8TER0 Y_RNA.28-201ENST00000362554 111 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 Y_RNA.133-201ENST00000363428 110 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 Y_RNA.167-201ENST00000363735 109 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 DEFA7P-201ENST00000382676 285 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 RNU6-1106P-201ENST00000390845 107 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AL592114.1-201ENST00000403842 483 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 RN7SKP158-201ENST00000410453 326 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 POLHP1-201ENST00000411806 470 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 CYCSP49-201ENST00000420810 319 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AC093106.2-201ENST00000428212 385 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AL356867.1-201ENST00000429623 299 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.7□□□□□ -1.98
SNED1Q8TER0 MTND5P22-201ENST00000458380 195 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 SCARNA18-201ENST00000459004 134 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 RPS29P12-201ENST00000460178 152 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.7□□□□□ -1.98
SNED1Q8TER0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.7□□□□□ -1.98
SNED1Q8TER0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.7□□□□□ -1.98
SNED1Q8TER0 RNA5SP200-201ENST00000516360 103 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 RNU6-1092P-201ENST00000516955 87 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 COPS8P3-201ENST00000526024 482 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.7□□□□□ -1.98
SNED1Q8TER0 AC105137.2-201ENST00000569073 466 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.7□□□□□ -1.98
SNED1Q8TER0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.7□□□□□ -1.98
SNED1Q8TER0 AL670379.11-201ENST00000604059 253 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AL670379.10-201ENST00000604330 253 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 HSPE1P7-201ENST00000604681 321 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AL670379.12-201ENST00000605291 253 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AL670379.9-201ENST00000605428 253 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 DUSP12P1-201ENST00000612874 516 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AC009831.4-201ENST00000620744 325 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AC091925.1-201ENST00000623204 462 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AC027309.3-201ENST00000623419 351 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 MTND5P10-201ENST00000603719 1809 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 AC002543.1-201ENST00000299783 1954 ntBASIC2.7□□□□□ -1.98
SNED1Q8TER0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
SNED1Q8TER0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SNED1Q8TER0 Y_RNA.40-201ENST00000362645 93 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 RNU6-1159P-201ENST00000362933 107 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 RNU6-1188P-201ENST00000363795 107 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 U8.8-201ENST00000365399 135 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 RNU6-637P-201ENST00000384050 107 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 RNU6-574P-201ENST00000384265 107 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms