Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AL442644.1-201ENST00000454390 3105 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 CDR1-202ENST00000625883 1485 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.09□□□□□ -2.39
SPTSSBQ8NFR3 MIRLET7D-201ENST00000362263 87 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 SNORD3E-201ENST00000362899 217 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 RNU1-96P-201ENST00000364163 162 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-534P-201ENST00000364877 106 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-72P-201ENST00000384285 79 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 SNORA11.2-201ENST00000408318 127 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-1025P-201ENST00000410629 104 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 RNU4-27P-201ENST00000410889 139 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AL590556.1-201ENST00000423231 483 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 DPRXP1-201ENST00000426312 460 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 SEPT7P5-201ENST00000434048 306 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AC073910.1-201ENST00000445047 438 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AC233266.1-201ENST00000454518 96 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 snoU13.26-201ENST00000459452 105 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AC104982.1-201ENST00000478775 574 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 HMGB1P28-201ENST00000507778 552 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 MIR449C-201ENST00000516047 92 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AC098483.2-201ENST00000603158 454 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AL136363.2-201ENST00000604173 851 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AC242852.1-201ENST00000612151 96 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AC243829.6-201ENST00000612652 106 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AC244015.1-201ENST00000622301 99 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AP000676.3-201ENST00000623299 569 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 SNORD3E-202ENST00000627253 216 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 AL512643.1-201ENST00000635735 524 ntBASIC0.09□□□□□ -2.4
SPTSSBQ8NFR3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 SNORA75B-201ENST00000384053 137 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 Y_RNA.500-201ENST00000384466 111 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-950P-201ENST00000384651 107 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 MIR216A-201ENST00000385063 110 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 RPL22P18-201ENST00000417197 377 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 OOSP1P1-201ENST00000423265 274 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 MTCYBP1-201ENST00000454315 1119 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 AL162395.1-201ENST00000457882 422 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 RN7SKP265-201ENST00000516448 223 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 MIR4789-201ENST00000577469 82 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 HMGN1P30-201ENST00000589286 268 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 Z83818.1-201ENST00000603584 150 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 AC025811.1-201ENST00000604312 472 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 AC018889.1-201ENST00000605372 397 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 AC092354.1-201ENST00000606057 376 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 AL450270.1-201ENST00000606160 391 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 AC017083.3-201ENST00000609955 700 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 AC009509.4-201ENST00000619202 509 ntBASIC0.08□□□□□ -2.4
SPTSSBQ8NFR3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 RNA5SP299-201ENST00000391203 116 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 MIR1289-2-201ENST00000408360 111 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AL365338.1-201ENST00000422282 858 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 FABP5P4-201ENST00000437203 171 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 SNRPEP8-201ENST00000442866 260 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AL606662.1-201ENST00000445763 553 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 SEPT14P24-201ENST00000447236 180 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 RNU7-59P-201ENST00000459101 61 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 RNU7-21P-201ENST00000459430 62 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 MTND2P33-201ENST00000506452 1031 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AC034244.1-201ENST00000507687 207 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AC024589.1-201ENST00000512207 263 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AL157871.3-201ENST00000557231 293 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 MIR5695-201ENST00000579717 85 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AC091135.1-201ENST00000585943 307 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AC068620.3-201ENST00000602749 560 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AL513534.2-201ENST00000603836 250 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AC012557.2-201ENST00000605919 418 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AC083806.3-201ENST00000614016 455 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AL159152.1-201ENST00000635019 2587 ntBASIC0.07□□□□□ -2.4
SPTSSBQ8NFR3 AL079343.1-201ENST00000572358 1771 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AC009541.1-201ENST00000438279 2662 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-349P-201ENST00000362402 107 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-707P-201ENST00000364647 95 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-744P-201ENST00000365557 107 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 SNORA4.3-201ENST00000365564 137 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-1316P-201ENST00000384242 108 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms