Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MIR6866-201ENST00000638146 69 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC099786.3-201ENST00000565735 1410 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RNU6-955P-201ENST00000410497 104 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 USP9YP26-201ENST00000421008 661 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RPS20P10-201ENST00000451209 253 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 snoU13.9-201ENST00000458927 103 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 MTND3P5-201ENST00000512798 333 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 MIR5708-201ENST00000579723 85 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC123900.1-201ENST00000420390 96 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 EEF1A1P39-201ENST00000440791 250 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RPL31P3-201ENST00000458430 332 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RPS26P55-201ENST00000471178 356 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RPL36AP48-201ENST00000485521 314 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 CYCSP27-201ENST00000527643 293 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 ZNF971P-201ENST00000562068 1249 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 MTCYBP33-201ENST00000575007 1130 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC012213.3-201ENST00000577199 777 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AL121890.5-201ENST00000620848 304 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RNU6-843P-201ENST00000384454 104 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AL365338.1-201ENST00000422282 858 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC104692.1-201ENST00000472406 90 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC005776.1-201ENST00000603164 290 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 SNORA26.3-201ENST00000391119 136 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 MTCO1P21-201ENST00000416634 589 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC007919.1-201ENST00000429380 217 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC005094.1-201ENST00000440420 368 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 BTF3P15-201ENST00000455606 336 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RNU6-775P-201ENST00000459318 96 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 UBL5P1-201ENST00000507979 193 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RNU6-1315P-201ENST00000517187 99 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AC136932.1-201ENST00000574771 208 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.22□□□□□ -2.37
SYNE1Q8NF91 AL590240.4-201ENST00000616908 390 ntBASIC0.22□□□□□ -2.37
SYNE1Q8NF91 RNU6-512P-201ENST00000364438 103 ntBASIC0.22□□□□□ -2.38
SYNE1Q8NF91 RNU6-1187P-201ENST00000364771 110 ntBASIC0.22□□□□□ -2.38
SYNE1Q8NF91 RPL23AP95-201ENST00000426806 265 ntBASIC0.22□□□□□ -2.38
SYNE1Q8NF91 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.22□□□□□ -2.38
SYNE1Q8NF91 PRELID3BP1-201ENST00000457142 540 ntBASIC0.22□□□□□ -2.38
SYNE1Q8NF91 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.22□□□□□ -2.38
SYNE1Q8NF91 AC079140.2-201ENST00000506193 142 ntBASIC0.22□□□□□ -2.38
SYNE1Q8NF91 AC010587.2-201ENST00000511727 448 ntBASIC0.22□□□□□ -2.38
SYNE1Q8NF91 AC104417.1-201ENST00000523974 751 ntBASIC0.22□□□□□ -2.38
SYNE1Q8NF91 OR8K2P-201ENST00000524645 927 ntBASIC0.22□□□□□ -2.38
SYNE1Q8NF91 VN1R83P-201ENST00000595685 445 ntBASIC0.22□□□□□ -2.38
SYNE1Q8NF91 BNIP3P30-201ENST00000601184 574 ntBASIC0.22□□□□□ -2.38
SYNE1Q8NF91 RNU4-56P-201ENST00000364700 142 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-946P-201ENST00000383878 107 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-224P-201ENST00000384055 107 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-166P-201ENST00000384371 107 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RN7SKP61-201ENST00000410642 295 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL035666.1-201ENST00000446195 348 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL157398.1-201ENST00000452981 186 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RPS27P22-201ENST00000478056 241 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 MIR3136-201ENST00000583498 78 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 BNIP3P27-201ENST00000599991 412 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL121652.1-201ENST00000608851 448 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 GHRLOS.1-201ENST00000610995 70 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL118556.2-201ENST00000614375 824 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-1167P-201ENST00000363227 94 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL356776.1-201ENST00000406574 447 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 ELOCP17-201ENST00000414751 326 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 ELOCP9-201ENST00000418624 239 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 USP9YP18-201ENST00000425912 695 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 USP9YP24-201ENST00000434374 697 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 USP9YP17-201ENST00000444617 696 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 COX6CP6-201ENST00000490840 228 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC008628.1-201ENST00000508663 265 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC018630.3-201ENST00000542637 96 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RPL30P11-203ENST00000598995 310 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC078795.2-201ENST00000602835 1252 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 SCARNA4-202ENST00000625402 129 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms