Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.55□□□□□ -2
SLC38A9Q8NBW4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.55□□□□□ -2
SLC38A9Q8NBW4 SCOCP1-201ENST00000554676 349 ntBASIC2.55□□□□□ -2
SLC38A9Q8NBW4 RPS15AP11-201ENST00000594193 385 ntBASIC2.55□□□□□ -2
SLC38A9Q8NBW4 AL359198.2-201ENST00000611836 194 ntBASIC2.55□□□□□ -2
SLC38A9Q8NBW4 AL359854.1-201ENST00000614203 1594 ntBASIC2.55□□□□□ -2
SLC38A9Q8NBW4 uc_338.15-201ENST00000615470 191 ntBASIC2.55□□□□□ -2
SLC38A9Q8NBW4 RN7SL853P-201ENST00000617250 223 ntBASIC2.55□□□□□ -2
SLC38A9Q8NBW4 AC022306.2-201ENST00000617563 647 ntBASIC2.55□□□□□ -2
SLC38A9Q8NBW4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.55□□□□□ -2
SLC38A9Q8NBW4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SLC38A9Q8NBW4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.55□□□□□ -2
SLC38A9Q8NBW4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SLC38A9Q8NBW4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SLC38A9Q8NBW4 AC026241.1-201ENST00000517873 2142 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 RPL9P7-201ENST00000330965 580 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 MIR26A1-201ENST00000362205 77 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 SNORD114-19-201ENST00000363072 75 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 Y_RNA.301-201ENST00000364990 103 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 RNU6-487P-201ENST00000365430 104 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 RNU6-933P-201ENST00000384424 107 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 RNA5SP390-201ENST00000410191 113 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 RPL19P1-201ENST00000411635 428 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AL451074.5-201ENST00000415894 435 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AL139396.1-201ENST00000421137 167 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AL590632.1-201ENST00000424289 371 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 MTND5P20-201ENST00000448677 143 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 RPS3P1-201ENST00000456781 192 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AC130509.1-201ENST00000464158 433 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 RPL9P9-202ENST00000466501 579 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AC018437.1-201ENST00000492214 406 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 SMURF2P1-201ENST00000514992 481 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 Y_RNA.682-201ENST00000516457 100 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 RNA5SP454-201ENST00000517231 127 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 COX6CP5-201ENST00000527162 228 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 HSPE1P20-201ENST00000538133 289 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 MIR4790-201ENST00000577799 79 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 UBE2V2P2-201ENST00000587677 504 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 AC005046.1-201ENST00000608515 625 ntBASIC2.54□□□□□ -2
SLC38A9Q8NBW4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.54□□□□□ -2
SLC38A9Q8NBW4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 SNORA68.1-201ENST00000364537 132 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 XGY1-201ENST00000381172 446 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 MIR544A-201ENST00000384855 91 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 RPS29P13-201ENST00000402041 169 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 RNU6-1140P-201ENST00000410517 106 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 AL645568.3-201ENST00000433683 316 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 U8.21-201ENST00000459536 136 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 SNRPGP7-201ENST00000469016 106 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 RPL30P12-201ENST00000474666 353 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 AP001025.1-201ENST00000486139 332 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 MTCO1P29-201ENST00000496868 288 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 RPL39P5-202ENST00000512505 151 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 RNA5SP112-201ENST00000515937 99 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 SNORA31.18-201ENST00000517043 134 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 TRAV32-201ENST00000553993 340 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 BNIP3P16-201ENST00000589779 534 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 uc_338.5-201ENST00000611839 155 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 AL355073.2-201ENST00000612106 557 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 MIR6817-201ENST00000615588 66 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 AL133216.2-202ENST00000634512 349 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 AC241585.2-209ENST00000638217 143 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.53□□□□□ -2
SLC38A9Q8NBW4 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.53□□□□□ -2
SLC38A9Q8NBW4 Z75746.1-201ENST00000440243 2080 ntBASIC2.53□□□□□ -2.01
SLC38A9Q8NBW4 MTND4P23-201ENST00000447723 1363 ntBASIC2.52□□□□□ -2.01
SLC38A9Q8NBW4 MTND4P12-201ENST00000498999 1377 ntBASIC2.52□□□□□ -2.01
SLC38A9Q8NBW4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLC38A9Q8NBW4 Y_RNA.135-201ENST00000363439 95 ntBASIC2.52□□□□□ -2.01
SLC38A9Q8NBW4 Y_RNA.166-201ENST00000363730 102 ntBASIC2.52□□□□□ -2.01
SLC38A9Q8NBW4 RNU6-1317P-201ENST00000364582 104 ntBASIC2.52□□□□□ -2.01
SLC38A9Q8NBW4 RNU6-622P-201ENST00000384272 103 ntBASIC2.52□□□□□ -2.01
SLC38A9Q8NBW4 RNU6-790P-201ENST00000384479 105 ntBASIC2.52□□□□□ -2.01
SLC38A9Q8NBW4 RNU6-95P-201ENST00000384697 107 ntBASIC2.52□□□□□ -2.01
SLC38A9Q8NBW4 SNORD88.1-201ENST00000408684 91 ntBASIC2.52□□□□□ -2.01
SLC38A9Q8NBW4 RNA5SP492-201ENST00000411330 114 ntBASIC2.52□□□□□ -2.01
SLC38A9Q8NBW4 AL030996.1-201ENST00000411430 235 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms