Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 RPS3AP23-202ENST00000574601 686 ntBASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 MIR5194-201ENST00000582634 120 ntBASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 AC002984.1-201ENST00000591692 448 ntBASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 AC092807.2-201ENST00000609367 243 ntBASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 MIR6134-201ENST00000617606 109 ntBASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 uc_338.11-201ENST00000619132 160 ntBASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 AC097372.5-201ENST00000623665 376 ntBASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 AC100810.6-201ENST00000638068 285 ntBASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 AC004520.1-201ENST00000608362 1413 ntBASIC1.89□□□□□ -2.11
LINC01555Q8NAE3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 Y_RNA.324-201ENST00000365165 102 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 RNA5SP37-201ENST00000365420 130 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 RNU6-877P-201ENST00000383868 107 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 RNU6-72P-201ENST00000384285 79 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 SNORD73A-201ENST00000386062 65 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 RNU6-750P-201ENST00000390946 107 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 CIR1P3-201ENST00000405137 479 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 HMGB3P2-201ENST00000411913 584 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 SUMO1P4-201ENST00000429430 302 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 AL121890.1-201ENST00000435457 205 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 MTATP6P13-201ENST00000438531 667 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 HMGB1P30-201ENST00000492455 606 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 AC090255.1-201ENST00000495779 349 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 MTCYBP18-201ENST00000501056 747 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 SNORA31.6-201ENST00000516241 130 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 BTF3P12-201ENST00000519620 469 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 NACAP3-201ENST00000552100 481 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 AC091152.3-201ENST00000604227 325 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 RNU6-89P-201ENST00000606519 100 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 AC116312.1-201ENST00000606841 314 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 U2.17-201ENST00000611454 95 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 U6atac.1-201ENST00000616025 117 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 AC138627.2-201ENST00000624202 601 ntBASIC1.88□□□□□ -2.11
LINC01555Q8NAE3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 Y_RNA.231-201ENST00000364358 102 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 Y_RNA.248-201ENST00000364501 109 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 MIR514A2-201ENST00000385131 88 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 MIR514A3-201ENST00000385132 88 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 MIR1277-201ENST00000408536 78 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 POLHP1-201ENST00000411806 470 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 MRPS10P2-201ENST00000431226 381 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 HMGB1P31-201ENST00000437242 427 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 AC004383.1-201ENST00000438135 289 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 RNU7-167P-201ENST00000459160 62 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 MRPL42P6-201ENST00000486397 371 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 AC090096.1-201ENST00000489168 390 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 Y_RNA.665-201ENST00000516177 98 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 RNU1-40P-201ENST00000516816 164 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 RNU1-97P-201ENST00000516872 164 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 ACA59.2-201ENST00000517061 156 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 SNORA25.17-201ENST00000517184 124 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 CENPUP1-201ENST00000526649 1202 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 AC090115.3-201ENST00000553218 849 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 OR11H5P-201ENST00000554039 926 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 MYL12BP1-201ENST00000569826 507 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 MIR3616-201ENST00000584070 92 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 AP003465.2-201ENST00000602571 373 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 AL356280.1-201ENST00000603614 379 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 DISC2.1-201ENST00000612827 205 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 AC090617.10-201ENST00000624308 134 ntBASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LINC01555Q8NAE3 CDC27P3-201ENST00000635418 1910 ntBASIC1.86□□□□□ -2.11
LINC01555Q8NAE3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LINC01555Q8NAE3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
LINC01555Q8NAE3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
LINC01555Q8NAE3 Y_RNA.167-201ENST00000363735 109 ntBASIC1.86□□□□□ -2.11
LINC01555Q8NAE3 RNU6-522P-201ENST00000364497 107 ntBASIC1.86□□□□□ -2.11
LINC01555Q8NAE3 RNU6-1072P-201ENST00000384703 107 ntBASIC1.86□□□□□ -2.11
LINC01555Q8NAE3 RNU6-443P-201ENST00000384780 107 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms