Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 HSPE1P26-201ENST00000405341 275 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 MTCO3P8-201ENST00000453691 755 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 SNORD127-201ENST00000458892 86 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 AC133134.1-201ENST00000466800 359 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 AC139453.3-201ENST00000493276 369 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 AL359273.1-201ENST00000510918 627 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-1143P-201ENST00000516125 104 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 IGHV3-76-201ENST00000522465 295 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 MIR2682-201ENST00000580305 110 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 AC005046.1-201ENST00000608515 625 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 AC078938.1-201ENST00000620993 318 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 AL513302.2-201ENST00000562313 1842 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 RNU1-70P-201ENST00000362618 164 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 U3.6-201ENST00000363622 211 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.562-201ENST00000384695 113 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-713P-201ENST00000384761 107 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 MIR10A-201ENST00000385043 110 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 SAR1AP2-201ENST00000392696 594 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 OR2AQ1P-201ENST00000451972 200 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-1132P-201ENST00000459214 107 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 RN7SL330P-201ENST00000469709 307 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 RPL30P10-201ENST00000488148 337 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 SNORA31.19-201ENST00000517079 126 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 RNA5SP290-201ENST00000517133 127 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 AC103996.1-201ENST00000555468 102 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 AC078899.3-201ENST00000599065 212 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 MTND4LP5-201ENST00000605152 292 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 AL159153.1-201ENST00000619688 317 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 AC022149.2-201ENST00000621061 203 ntBASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC44A3Q8N4M1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 RNU4-50P-201ENST00000364361 141 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.350-201ENST00000365409 98 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.376-201ENST00000365638 108 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.526-201ENST00000384572 110 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 EI24P2-201ENST00000397776 1076 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 MIR1290-201ENST00000408735 78 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-130P-201ENST00000411112 103 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 AL356968.1-201ENST00000416622 474 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 RNU7-169P-201ENST00000459456 61 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 U8.21-201ENST00000459536 136 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 RPL21P104-201ENST00000464143 478 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 RPL23AP67-201ENST00000465341 474 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 AC034114.1-201ENST00000520293 285 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 AC104984.5-201ENST00000586878 94 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 AC008121.1-201ENST00000603244 268 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 uc_338.1-201ENST00000612113 180 ntBASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC44A3Q8N4M1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AP000560.1-201ENST00000624150 1937 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.64-201ENST00000362845 102 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.105-201ENST00000363182 111 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 SNORA51.11-201ENST00000384442 131 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 MIR521-1-201ENST00000384902 87 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 MIR607-201ENST00000385241 96 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 MIR548I3-201ENST00000408378 149 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 MIR548I1-201ENST00000408810 149 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.592-201ENST00000410274 109 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 RN7SKP220-201ENST00000410611 288 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 RNU2-38P-201ENST00000410856 79 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC126124.2-201ENST00000413542 321 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC139712.2-201ENST00000424302 339 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC007919.1-201ENST00000429380 217 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms