Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
TMEFF1Q8IYR6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 AC009541.1-201ENST00000438279 2662 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 RNU6-879P-201ENST00000364328 108 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 RNU6-514P-201ENST00000384208 107 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 RNU6-21P-201ENST00000384710 107 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 MIR708-201ENST00000390708 88 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 RPS4XP3-201ENST00000398541 413 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 RNU4-30P-201ENST00000410245 143 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 RNU2-51P-201ENST00000410708 197 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 RNU6-1135P-201ENST00000411083 103 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 AC007560.1-201ENST00000426912 237 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 AC124916.1-201ENST00000444020 547 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 AC025518.1-201ENST00000479856 347 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 AL049830.2-201ENST00000480072 201 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 RNA5SP290-201ENST00000517133 127 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 MIR4423-201ENST00000580922 80 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 AC108706.1-201ENST00000611053 297 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.72□□□□□ -1.81
TMEFF1Q8IYR6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
TMEFF1Q8IYR6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
TMEFF1Q8IYR6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.71□□□□□ -1.81
TMEFF1Q8IYR6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
TMEFF1Q8IYR6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
TMEFF1Q8IYR6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 SNORD115-32-201ENST00000364079 82 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 RNU6-968P-201ENST00000384076 107 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 Y_RNA.435-201ENST00000384095 112 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 RNU1-139P-201ENST00000391307 165 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 Z85995.1-201ENST00000415547 335 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 OOSP1P1-201ENST00000423265 274 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 AL078601.1-201ENST00000444542 271 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 AC092798.1-201ENST00000458542 409 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 SNORD105B-201ENST00000458770 79 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 AC073901.1-201ENST00000462471 408 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 RPL21P10-201ENST00000463521 490 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 RNU6-572P-201ENST00000516724 80 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 RNU7-110P-201ENST00000516891 62 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 RPL23AP88-201ENST00000605759 454 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 SNORA62.6-201ENST00000606322 83 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 MIR8058-201ENST00000615737 89 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 AL365361.1-201ENST00000566942 3481 ntBASIC3.71□□□□□ -1.82
TMEFF1Q8IYR6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 SNORD9-201ENST00000362566 104 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 RNU6-78P-201ENST00000362897 107 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 MIR607-201ENST00000385241 96 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 RNA5SP213-201ENST00000391031 106 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 U3.39-201ENST00000408569 239 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 SNORD12B-201ENST00000410433 91 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 RNA5SP306-201ENST00000411087 107 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 BMS1P22-201ENST00000414726 313 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 SNORA71B-202ENST00000439232 272 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 AC007395.1-201ENST00000451333 677 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 AL645939.1-201ENST00000453429 797 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 RN7SL807P-201ENST00000470923 297 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 RAC1P2-201ENST00000511164 579 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 SNORA31.8-201ENST00000516327 108 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 Y_RNA.676-201ENST00000516393 96 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 SNORA27.4-201ENST00000516650 95 ntBASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEFF1Q8IYR6 AC068254.2-201ENST00000623938 3577 ntBASIC3.69□□□□□ -1.82
TMEFF1Q8IYR6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms