Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC098848.2-201ENST00000588023 330 ntBASIC1.59□□□□□ -2.15
CDKL3Q8IVW4 AP000942.3-201ENST00000603702 160 ntBASIC1.59□□□□□ -2.15
CDKL3Q8IVW4 AC098614.4-201ENST00000607601 462 ntBASIC1.59□□□□□ -2.15
CDKL3Q8IVW4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.59□□□□□ -2.15
CDKL3Q8IVW4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.59□□□□□ -2.15
CDKL3Q8IVW4 FARSBP1-201ENST00000435808 1778 ntBASIC1.59□□□□□ -2.16
CDKL3Q8IVW4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CDKL3Q8IVW4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 FGF7P2-201ENST00000332473 296 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 RNU6-116P-201ENST00000384042 109 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 RNU6-297P-201ENST00000384636 107 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 MIR186-201ENST00000384988 86 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 RNA5SP213-201ENST00000391031 106 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AL365400.1-201ENST00000431854 640 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AP001025.1-201ENST00000486139 332 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 RNU2-53P-201ENST00000516257 147 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 SNORA43.2-201ENST00000516652 128 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AC093249.1-201ENST00000567049 203 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AC022254.1-201ENST00000567857 235 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AC012414.6-201ENST00000568241 401 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 MIR3198-2-201ENST00000577868 80 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 MIR5692A1-201ENST00000580523 69 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 MIR98-201ENST00000606724 119 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AC103810.8-201ENST00000607347 118 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 uc_338.15-201ENST00000615470 191 ntBASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.58□□□□□ -2.16
CDKL3Q8IVW4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 RNU6-622P-201ENST00000384272 103 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 RNA5SP465-201ENST00000391195 109 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 OR6C66P-201ENST00000414917 930 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 MTND3P17-201ENST00000416968 344 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 GPR143P-201ENST00000434155 205 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 HMGB1P31-201ENST00000437242 427 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 AC079781.2-201ENST00000446424 169 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 AMD1P1-201ENST00000457220 922 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 RNA5SP269-201ENST00000459032 137 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 SNORD42A-201ENST00000459584 64 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 AC006512.1-201ENST00000468816 291 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 MTND3P7-201ENST00000474435 343 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 MTND3P25-201ENST00000509243 135 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 Y_RNA.675-201ENST00000516389 149 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 SNORA18.6-201ENST00000516792 115 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 RNU6-667P-201ENST00000517186 102 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 BNIP3P6-201ENST00000549284 499 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 AC073539.2-201ENST00000597113 165 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 NIFKP6-201ENST00000598115 845 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 AC064872.1-201ENST00000604823 1072 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 AC026585.1-201ENST00000619582 524 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 AC120349.3-201ENST00000624377 529 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 U6.114-201ENST00000636407 96 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 MTND5P17-201ENST00000418405 1603 ntBASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CDKL3Q8IVW4 Y_RNA.40-201ENST00000362645 93 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 RNU6-529P-201ENST00000363383 104 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 SNORA62.1-201ENST00000364287 154 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 RNU6-74P-201ENST00000384235 107 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 AC074117.2-201ENST00000417130 397 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 RPS6P15-201ENST00000431996 751 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 AC006026.2-201ENST00000457376 180 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 AP002453.2-201ENST00000533503 320 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 AP000763.2-201ENST00000540641 163 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 CLIC4P2-201ENST00000601934 717 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 Z94722.1-201ENST00000604328 474 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 AP000770.2-201ENST00000623694 100 ntBASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms