Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC135776.4-201ENST00000624300 1904 ntBASIC1.93□□□□□ -2.1
RAI1Q7Z5J4 MTND4P5-201ENST00000435821 1374 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 HAUS6P2-201ENST00000433254 2404 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 Y_RNA.157-201ENST00000363638 102 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 RNU6-105P-201ENST00000363909 104 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 RNU1-91P-201ENST00000364746 163 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 AC138623.1-201ENST00000418060 216 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 MTCO3P30-201ENST00000426425 670 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 AC010975.2-201ENST00000427781 588 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 AL669831.1-202ENST00000428504 417 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 ERLEC1P1-201ENST00000433806 578 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 GTF2IP13-201ENST00000438487 386 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 HMGN2P10-201ENST00000448085 265 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 AC026464.5-201ENST00000562497 722 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 MIR4424-201ENST00000585257 86 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 MIR6134-201ENST00000617606 109 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 MIR7515-201ENST00000637837 67 ntBASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAI1Q7Z5J4 SNORD114-19-201ENST00000363072 75 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 SNORA64-201ENST00000384674 134 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 MIR95-201ENST00000385072 81 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 U6atac.2-201ENST00000408644 118 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 FABP5P14-201ENST00000437273 393 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 U8.21-201ENST00000459536 136 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AC011005.2-201ENST00000487324 359 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 RNU6-718P-201ENST00000516166 105 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 RNA5SP503-201ENST00000517047 117 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 RPS15AP11-201ENST00000594193 385 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 MIR6845-201ENST00000613182 61 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AC009831.4-201ENST00000620744 325 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AC027514.1-201ENST00000588561 1603 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AC002543.1-201ENST00000299783 1954 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 ZNF271P-202ENST00000465539 1970 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 RNU6-534P-201ENST00000364877 106 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 RNA5SP181-201ENST00000410246 98 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 SNORD56-201ENST00000413522 71 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 EIF1P1-201ENST00000421436 341 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 RPS3AP44-201ENST00000425466 790 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 RPL22P13-201ENST00000493291 347 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 SNORA25.11-201ENST00000515935 105 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 RNU6-1088P-201ENST00000516850 104 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AC105137.2-201ENST00000569073 466 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 BNIP3P25-201ENST00000596023 559 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 AL133215.3-201ENST00000609801 448 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 uc_338.34-201ENST00000617467 174 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 U4.7-201ENST00000638126 106 ntBASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RAI1Q7Z5J4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.9□□□□□ -2.1
RAI1Q7Z5J4 RNA5SP393-201ENST00000363423 117 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 MIR544A-201ENST00000384855 91 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 U8.13-201ENST00000390842 128 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 OR9R1P-201ENST00000412200 877 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 RPL7P37-201ENST00000425095 738 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 AC083904.1-201ENST00000487828 231 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 AC108210.2-201ENST00000503681 201 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 Y_RNA.693-201ENST00000516641 110 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 ACA59.2-201ENST00000517061 156 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 AC010525.2-201ENST00000590920 195 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 AL356575.1-201ENST00000603008 283 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 AC104458.1-201ENST00000608243 463 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 AF250324.2-201ENST00000608299 610 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
RAI1Q7Z5J4 Y_RNA.151-201ENST00000363566 112 ntBASIC1.89□□□□□ -2.11
RAI1Q7Z5J4 Y_RNA.295-201ENST00000364918 102 ntBASIC1.89□□□□□ -2.11
RAI1Q7Z5J4 RNU4-12P-201ENST00000365233 139 ntBASIC1.89□□□□□ -2.11
RAI1Q7Z5J4 SNORA16.2-201ENST00000390991 127 ntBASIC1.89□□□□□ -2.11
RAI1Q7Z5J4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.89□□□□□ -2.11
RAI1Q7Z5J4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms