Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 SNORA25.1-201ENST00000362326 128 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 SNORD114-19-201ENST00000363072 75 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 RNU6-799P-201ENST00000363567 107 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 RNU6-245P-201ENST00000384020 107 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 MIR549A-201ENST00000385268 96 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 MIR320B2-201ENST00000408479 138 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 MIR1911-201ENST00000410783 80 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 SNORA74C-2-201ENST00000411179 201 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AL138752.1-201ENST00000452964 351 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 U3.44-201ENST00000458938 192 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 SNORA31.21-201ENST00000517180 77 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AC012493.2-201ENST00000595083 291 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AL365434.2-201ENST00000607979 234 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AC069200.1-201ENST00000609511 323 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 AC005520.5-201ENST00000613926 164 ntBASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NLRC3Q7RTR2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 MIR423-201ENST00000362201 94 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 Y_RNA.83-201ENST00000363005 113 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 RNU6-529P-201ENST00000363383 104 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 RNA5SP509-201ENST00000364577 119 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 SNORA62-201ENST00000365493 153 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 RNU6-1062P-201ENST00000383908 107 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 RNU6-514P-201ENST00000384208 107 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 RNU6-793P-201ENST00000384233 104 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 MIR659-201ENST00000384963 97 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 CBX3P9-201ENST00000402326 552 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 SNORA3C-201ENST00000408792 125 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 UQCRBP2-201ENST00000447827 297 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 RN7SL98P-201ENST00000462271 300 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 AC006517.1-201ENST00000480485 328 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 AC074133.1-201ENST00000515696 183 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 GNRHR2P1-201ENST00000555315 631 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 AC233702.2-202ENST00000562547 291 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 AC025281.1-201ENST00000567026 265 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 AC008749.1-201ENST00000597650 306 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 AL391813.1-201ENST00000603098 260 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 MZT1P2-201ENST00000604387 248 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 AL137843.1-201ENST00000605078 385 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 uc_338.13-201ENST00000618243 179 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 AC006001.4-201ENST00000622243 395 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 AL136164.4-201ENST00000625013 2135 ntBASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NLRC3Q7RTR2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 Z82217.1-201ENST00000625157 8149 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 SNORA72.2-201ENST00000365028 127 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 Y_RNA.331-201ENST00000365267 102 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 Y_RNA.555-201ENST00000384673 110 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 MIR3065-201ENST00000390137 79 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 RPL23AP36-201ENST00000413895 458 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 snoU13.14-201ENST00000459372 104 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 RNU6-625P-201ENST00000459412 107 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 RN7SL303P-201ENST00000469773 251 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 SNORA31.1-201ENST00000515993 133 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 SNORA31.5-201ENST00000516190 133 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 RNA5SP143-201ENST00000516936 115 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 KLKP1-201ENST00000595979 403 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 IPO5P1-202ENST00000600039 287 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 AC113403.1-201ENST00000604910 193 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 MIR378J-201ENST00000611988 109 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 MIR486-1-201ENST00000612171 68 ntBASIC3.69□□□□□ -1.82
NLRC3Q7RTR2 AC004792.1-201ENST00000614523 137 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms