Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MIR29C-201ENST00000385231 88 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 MTND1P23-201ENST00000416931 372 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.15□□□□□ -2.07
C11orf88Q6PI97 CBX3P6-201ENST00000430257 527 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AC244670.1-201ENST00000436879 112 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.15□□□□□ -2.07
C11orf88Q6PI97 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.15□□□□□ -2.07
C11orf88Q6PI97 RNU7-167P-201ENST00000459160 62 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 RN7SL429P-201ENST00000479090 223 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 RN7SL489P-201ENST00000486185 223 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 RN7SL327P-201ENST00000488659 223 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AC093259.1-201ENST00000509755 300 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AC107222.1-201ENST00000510899 637 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
C11orf88Q6PI97 Y_RNA.688-201ENST00000516565 95 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.15□□□□□ -2.07
C11orf88Q6PI97 BNIP3P16-201ENST00000589779 534 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AC110760.3-201ENST00000598794 467 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AC012507.3-201ENST00000603556 477 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AC025811.1-201ENST00000604312 472 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.15□□□□□ -2.07
C11orf88Q6PI97 RN7SL853P-201ENST00000617250 223 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 uc_338.34-201ENST00000617467 174 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 U4.3-201ENST00000621047 82 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AC091932.3-201ENST00000624223 323 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 IGHVIII-44-202ENST00000636235 289 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 AC005336.3-201ENST00000623833 2679 ntBASIC2.15□□□□□ -2.07
C11orf88Q6PI97 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
C11orf88Q6PI97 RNU6-1285P-201ENST00000363480 105 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 MIR597-201ENST00000384968 97 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 RNU2-40P-201ENST00000410833 196 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 RNA5SP508-201ENST00000411327 119 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.14□□□□□ -2.07
C11orf88Q6PI97 USP9YP20-201ENST00000419224 558 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AL353689.1-201ENST00000438895 199 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.14□□□□□ -2.07
C11orf88Q6PI97 RPL31P3-201ENST00000458430 332 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.14□□□□□ -2.07
C11orf88Q6PI97 RNA5SP282-201ENST00000516355 108 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.14□□□□□ -2.07
C11orf88Q6PI97 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.14□□□□□ -2.07
C11orf88Q6PI97 MIR3611-201ENST00000584484 83 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AC010620.1-201ENST00000601088 1102 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AL096840.1-201ENST00000603287 93 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AL391646.1-201ENST00000603860 190 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AP000654.2-201ENST00000605633 586 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 AL022345.1-201ENST00000607292 135 ntBASIC2.14□□□□□ -2.07
C11orf88Q6PI97 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
C11orf88Q6PI97 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 RNU4-82P-201ENST00000362443 140 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 RNU4-52P-201ENST00000384209 138 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 SNORA41-201ENST00000384675 132 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 RNA5SP219-201ENST00000390940 113 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 RN7SKP284-201ENST00000411002 343 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AL163973.1-201ENST00000484753 577 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AC090255.1-201ENST00000495779 349 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 MRPS17P9-201ENST00000511924 393 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 SNORA31.16-201ENST00000516773 139 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AC109446.1-201ENST00000566172 220 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 MIR4299-201ENST00000577899 72 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AC005034.5-201ENST00000604219 466 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 AL354685.2-201ENST00000448218 1447 ntBASIC2.13□□□□□ -2.07
C11orf88Q6PI97 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
C11orf88Q6PI97 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
C11orf88Q6PI97 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
C11orf88Q6PI97 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
C11orf88Q6PI97 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
C11orf88Q6PI97 RNU4-15P-201ENST00000362613 141 ntBASIC2.12□□□□□ -2.07
C11orf88Q6PI97 RNU6-1141P-201ENST00000364520 107 ntBASIC2.12□□□□□ -2.07
C11orf88Q6PI97 RNU1-51P-201ENST00000365345 176 ntBASIC2.12□□□□□ -2.07
C11orf88Q6PI97 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
C11orf88Q6PI97 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.12□□□□□ -2.07
C11orf88Q6PI97 RNU6-1106P-201ENST00000390845 107 ntBASIC2.12□□□□□ -2.07
C11orf88Q6PI97 RNU4-55P-201ENST00000410731 137 ntBASIC2.12□□□□□ -2.07
C11orf88Q6PI97 SRIP3-201ENST00000413200 219 ntBASIC2.12□□□□□ -2.07
C11orf88Q6PI97 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
C11orf88Q6PI97 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.12□□□□□ -2.07
C11orf88Q6PI97 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.12□□□□□ -2.07
C11orf88Q6PI97 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
C11orf88Q6PI97 AL606489.2-201ENST00000433886 234 ntBASIC2.12□□□□□ -2.07
C11orf88Q6PI97 AC073415.1-201ENST00000449240 153 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms