Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 AC022364.2-201ENST00000457963 554 ntBASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 RPS29P15-201ENST00000458329 171 ntBASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 MRPS17P9-201ENST00000511924 393 ntBASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 AC117532.1-201ENST00000514638 323 ntBASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 AC022616.8-201ENST00000533569 253 ntBASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 AC091135.1-201ENST00000585943 307 ntBASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 NIFKP6-201ENST00000598115 845 ntBASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 AC078795.2-201ENST00000602835 1252 ntBASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 AC008945.2-201ENST00000606056 604 ntBASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 AL132822.1-201ENST00000617063 513 ntBASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 uc_338.11-201ENST00000619132 160 ntBASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.67□□□□□ -2.14
TRIM40Q6P9F5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 RNU6-527P-201ENST00000363425 104 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 PIGFP2-201ENST00000421400 651 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AL645568.3-201ENST00000433683 316 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 DNAJC19P4-201ENST00000440115 345 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AC244505.5-201ENST00000443639 207 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AC007677.1-201ENST00000445757 515 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 snoU13.23-201ENST00000458863 104 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AK6P1-201ENST00000540219 478 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 DEFB122-202ENST00000569013 197 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AL109918.3-201ENST00000603072 338 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AC004908.3-201ENST00000610248 625 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AC091834.1-201ENST00000614543 472 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AC120349.3-201ENST00000624377 529 ntBASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRIM40Q6P9F5 AP006437.1-201ENST00000641440 3685 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 RNU6-181P-201ENST00000363225 107 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 RNU6-105P-201ENST00000363909 104 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 RNU6-1303P-201ENST00000364841 107 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 RNU6-456P-201ENST00000384493 107 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 MIR29C-201ENST00000385231 88 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 MIR764-201ENST00000390811 85 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 RPS15AP10-201ENST00000432472 382 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 AL353689.1-201ENST00000438895 199 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 AL122001.1-201ENST00000457027 370 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 MTND2P33-201ENST00000506452 1031 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 RNU6-445P-201ENST00000516949 107 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 DUXAP5-201ENST00000529668 529 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 MIR4703-201ENST00000577728 79 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 MIR4299-201ENST00000577899 72 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 AL359314.1-201ENST00000616913 261 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 AC097372.5-201ENST00000623665 376 ntBASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRIM40Q6P9F5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-37P-201ENST00000362692 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 SNORD115-3-201ENST00000363100 82 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-11P-201ENST00000364234 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-25P-201ENST00000383873 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-1-201ENST00000383898 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-48P-201ENST00000384161 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-36P-201ENST00000384172 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-4P-201ENST00000384205 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-5P-201ENST00000384238 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-3P-201ENST00000384314 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-16P-201ENST00000384385 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-15P-201ENST00000384534 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-1222P-201ENST00000384615 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-2-201ENST00000384627 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-29P-201ENST00000384637 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-9-201ENST00000384776 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-33P-201ENST00000384793 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 MIR544A-201ENST00000384855 91 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 MIR1262-201ENST00000408276 93 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms