Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC38Q502W7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC38Q502W7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC38Q502W7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC38Q502W7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC38Q502W7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC38Q502W7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC38Q502W7 Y_RNA.40-201ENST00000362645 93 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 RNU6-655P-201ENST00000362858 107 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 RNU6-1210P-201ENST00000363775 107 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 RNU6-1141P-201ENST00000364520 107 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 RNU6-43P-201ENST00000384302 107 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 MIR512-1-201ENST00000384913 84 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 SNORA48.5-201ENST00000391143 135 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 AL030996.1-201ENST00000411430 235 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 AP000275.1-201ENST00000411943 390 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 AC114801.2-201ENST00000503825 781 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 AC046134.1-201ENST00000514454 666 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 SCARNA13-201ENST00000516672 275 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 RNU6-612P-201ENST00000516909 102 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC38Q502W7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC38Q502W7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC38Q502W7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC38Q502W7 AL022345.1-201ENST00000607292 135 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC38Q502W7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.95□□□□□ -1.94
CCDC38Q502W7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC38Q502W7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CCDC38Q502W7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC38Q502W7 CBX3P1-201ENST00000325243 554 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 RNU1-72P-201ENST00000362976 153 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 RNU6-1285P-201ENST00000363480 105 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 Y_RNA.279-201ENST00000364763 95 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 SNORA9.2-201ENST00000365361 133 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 RNU6-95P-201ENST00000384697 107 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC38Q502W7 MTND3P8-201ENST00000412909 339 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 RPL21P111-201ENST00000418453 477 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC38Q502W7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC38Q502W7 AC104389.3-201ENST00000445629 235 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC38Q502W7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC38Q502W7 AL121594.1-201ENST00000475906 575 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 RPL30P1-201ENST00000488676 339 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 AC140059.1-201ENST00000489238 361 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 AC116353.2-201ENST00000505332 712 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 RPL39P5-202ENST00000512505 151 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC38Q502W7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC38Q502W7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC38Q502W7 MIR5571-201ENST00000577998 113 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC38Q502W7 RPL30P11-203ENST00000598995 310 ntBASIC2.94□□□□□ -1.94
CCDC38Q502W7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC38Q502W7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC38Q502W7 RNU6-227P-201ENST00000362865 103 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 RNU6-1317P-201ENST00000364582 104 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 SNORD32A-201ENST00000364805 84 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 Y_RNA.301-201ENST00000364990 103 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC38Q502W7 RNU6-767P-201ENST00000384132 107 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC38Q502W7 CBX3P9-201ENST00000402326 552 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 RNU6-325P-201ENST00000411132 105 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC38Q502W7 AIMP1P2-201ENST00000425294 312 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 RPL23AP95-201ENST00000426806 265 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC38Q502W7 AC022018.1-201ENST00000430685 241 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC38Q502W7 AL031659.1-201ENST00000447075 539 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC38Q502W7 AC103975.1-201ENST00000482506 483 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 RNU6-566P-201ENST00000516790 107 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 RNU6-1088P-201ENST00000516850 104 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 AC109329.2-201ENST00000519658 482 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC38Q502W7 AC023824.2-201ENST00000566185 400 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.93□□□□□ -1.94
CCDC38Q502W7 CPDP1-201ENST00000579660 283 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 MIR4742-201ENST00000581069 85 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC38Q502W7 MIR5739-201ENST00000619803 80 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 AP000560.1-201ENST00000624150 1937 ntBASIC2.93□□□□□ -1.94
CCDC38Q502W7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
CCDC38Q502W7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CCDC38Q502W7 AC135776.4-201ENST00000624300 1904 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CCDC38Q502W7 MIR422A-201ENST00000362286 90 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 RNU6-933P-201ENST00000384424 107 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 AC138393.2-201ENST00000414742 246 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 AL590632.1-201ENST00000424289 371 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 AC078809.1-201ENST00000427601 140 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC38Q502W7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC38Q502W7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms