Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL356010.1-201ENST00000456364 102 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AL121594.1-201ENST00000475906 575 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.71□□□□□ -2.14
RFX4Q33E94 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.71□□□□□ -2.14
RFX4Q33E94 MTCO3P7-201ENST00000510008 774 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AC091133.4-201ENST00000511142 308 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 RPL23AP94-201ENST00000512518 302 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 RNU2-53P-201ENST00000516257 147 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.71□□□□□ -2.14
RFX4Q33E94 AC233702.2-202ENST00000562547 291 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AGGF1P4-201ENST00000568249 801 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 MIR4299-201ENST00000577899 72 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.71□□□□□ -2.14
RFX4Q33E94 AC073648.5-201ENST00000603502 305 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AL355297.2-201ENST00000604792 129 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AC022202.1-201ENST00000613515 211 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 uc_338.15-201ENST00000615470 191 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AC097372.5-201ENST00000623665 376 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AC022418.1-201ENST00000624118 445 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.71□□□□□ -2.14
RFX4Q33E94 U4.7-201ENST00000638126 106 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RFX4Q33E94 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
RFX4Q33E94 AP006437.1-201ENST00000641440 3685 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
RFX4Q33E94 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-37P-201ENST00000362692 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 Y_RNA.51-201ENST00000362725 102 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-552P-201ENST00000362869 119 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-11P-201ENST00000364234 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU5E-7P-201ENST00000365290 117 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-25P-201ENST00000383873 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-1-201ENST00000383898 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-48P-201ENST00000384161 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-36P-201ENST00000384172 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-4P-201ENST00000384205 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-5P-201ENST00000384238 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 SNORD116-2-201ENST00000384274 95 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-3P-201ENST00000384314 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-16P-201ENST00000384385 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-393P-201ENST00000384475 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-15P-201ENST00000384534 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-2-201ENST00000384627 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-29P-201ENST00000384637 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 SNORD116-6-201ENST00000384711 96 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-9-201ENST00000384776 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-33P-201ENST00000384793 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU2-23P-201ENST00000410545 195 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU2-63P-201ENST00000410792 194 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.7□□□□□ -2.14
RFX4Q33E94 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 SCARNA18-201ENST00000459004 134 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.7□□□□□ -2.14
RFX4Q33E94 RPL30P12-201ENST00000474666 353 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 TRBV12-1-201ENST00000479785 344 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.7□□□□□ -2.14
RFX4Q33E94 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.7□□□□□ -2.14
RFX4Q33E94 ANXA2P1-201ENST00000505539 926 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 AC108078.1-201ENST00000508073 725 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RFX4Q33E94 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.7□□□□□ -2.14
RFX4Q33E94 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.7□□□□□ -2.14
RFX4Q33E94 AC107393.1-201ENST00000512403 346 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RN7SKP298-201ENST00000515950 94 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 SNORA25.17-201ENST00000517184 124 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 AC109329.1-201ENST00000518744 317 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RFX4Q33E94 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.7□□□□□ -2.14
RFX4Q33E94 IMMP1LP2-201ENST00000552954 492 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 MIR4419B-201ENST00000577260 68 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 MIR3126-201ENST00000577443 74 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 MTND1P15-201ENST00000579262 949 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.7□□□□□ -2.14
RFX4Q33E94 MIR3611-201ENST00000584484 83 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 AC005034.5-201ENST00000604219 466 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 RNU6-6P-201ENST00000606623 107 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 AC002044.1-201ENST00000606707 158 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 AC008536.2-201ENST00000607284 349 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 uc_338.11-201ENST00000619132 160 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 AL159153.1-201ENST00000619688 317 ntBASIC1.7□□□□□ -2.14
RFX4Q33E94 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.7□□□□□ -2.14
RFX4Q33E94 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RFX4Q33E94 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.69□□□□□ -2.14
RFX4Q33E94 RNA5SP276-201ENST00000362580 94 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 U8.2-201ENST00000363156 134 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RFX4Q33E94 RNU6-1158P-201ENST00000391167 107 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 HMGN2P39-201ENST00000398005 273 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 RNA5SP390-201ENST00000410191 113 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.69□□□□□ -2.14
RFX4Q33E94 TOMM20P4-201ENST00000427861 435 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 AC073464.1-201ENST00000429823 534 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.69□□□□□ -2.14
RFX4Q33E94 AL365400.1-201ENST00000431854 640 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RFX4Q33E94 RPL32P28-201ENST00000443577 397 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 PRPS1P1-201ENST00000445305 876 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 AC073415.1-201ENST00000449240 153 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 AC012308.1-201ENST00000451232 178 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms