Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 MIR518D-201ENST00000385014 87 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 MIR561-201ENST00000385216 97 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.11□□□□□ -2.07
PTCH1Q13635 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.11□□□□□ -2.07
PTCH1Q13635 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.11□□□□□ -2.07
PTCH1Q13635 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.11□□□□□ -2.07
PTCH1Q13635 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PTCH1Q13635 ARL2BPP4-201ENST00000506854 471 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.11□□□□□ -2.07
PTCH1Q13635 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.11□□□□□ -2.07
PTCH1Q13635 RNU7-51P-201ENST00000516560 62 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 RNU1-92P-201ENST00000517017 135 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 AP003033.1-201ENST00000527244 415 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.11□□□□□ -2.07
PTCH1Q13635 MIR5697-201ENST00000578045 78 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.11□□□□□ -2.07
PTCH1Q13635 AC005771.1-201ENST00000585581 349 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 MIR15A-201ENST00000607334 83 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 MIR6840-201ENST00000611937 71 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.11□□□□□ -2.07
PTCH1Q13635 AC008121.3-201ENST00000618726 433 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 AL603839.4-201ENST00000624658 1005 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.11□□□□□ -2.07
PTCH1Q13635 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PTCH1Q13635 AC103710.2-202ENST00000641454 2853 ntBASIC2.11□□□□□ -2.07
PTCH1Q13635 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PTCH1Q13635 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PTCH1Q13635 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PTCH1Q13635 SNORD114-19-201ENST00000363072 75 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 Y_RNA.178-201ENST00000363832 102 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 RNU6-1119P-201ENST00000384349 108 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 RNU6-166P-201ENST00000384371 107 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 RNU6-342P-201ENST00000384521 104 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 Y_RNA.559-201ENST00000384686 107 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.1□□□□□ -2.07
PTCH1Q13635 AL663109.1-201ENST00000411498 844 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 AC127391.1-201ENST00000411737 98 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 EDDM3CP-201ENST00000415977 425 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 AL513185.2-201ENST00000425543 193 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 AL356583.2-201ENST00000426536 280 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 AC137499.1-201ENST00000427602 88 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.1□□□□□ -2.07
PTCH1Q13635 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.1□□□□□ -2.07
PTCH1Q13635 SNORD42A-201ENST00000459584 64 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.1□□□□□ -2.07
PTCH1Q13635 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.1□□□□□ -2.07
PTCH1Q13635 AF131216.2-201ENST00000512316 564 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 AGGF1P4-201ENST00000568249 801 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 MIR3118-1-201ENST00000581787 76 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 MIR3611-201ENST00000584484 83 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 AC007229.1-201ENST00000590455 412 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 AC104073.3-201ENST00000610942 955 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 AC104010.1-201ENST00000616889 150 ntBASIC2.1□□□□□ -2.07
PTCH1Q13635 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
PTCH1Q13635 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.1□□□□□ -2.07
PTCH1Q13635 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
PTCH1Q13635 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 Y_RNA.359-201ENST00000365498 102 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 SNORD115.1-201ENST00000391109 76 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 Y_RNA.598-201ENST00000410480 95 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 AC138623.1-201ENST00000418060 216 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 RPL23AP30-201ENST00000432419 501 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 AL031667.1-201ENST00000440222 725 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.09□□□□□ -2.07
PTCH1Q13635 ATP5J2P3-201ENST00000451550 258 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 MTND1P12-201ENST00000455231 147 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PTCH1Q13635 OR5AQ1P-201ENST00000527596 927 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 AC022878.1-201ENST00000530684 149 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.09□□□□□ -2.07
PTCH1Q13635 MIR4529-201ENST00000578110 78 ntBASIC2.09□□□□□ -2.07
PTCH1Q13635 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.09□□□□□ -2.07
PTCH1Q13635 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PTCH1Q13635 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
PTCH1Q13635 AC073343.1-201ENST00000328239 651 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 Y_RNA.295-201ENST00000364918 102 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 CIR1P3-201ENST00000405137 479 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 FTH1P15-201ENST00000406984 280 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 USP9YP14-201ENST00000430663 563 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.08□□□□□ -2.08
PTCH1Q13635 AL590365.1-201ENST00000450788 243 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 AL033528.1-201ENST00000453780 140 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.08□□□□□ -2.08
PTCH1Q13635 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.08□□□□□ -2.08
PTCH1Q13635 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.08□□□□□ -2.08
PTCH1Q13635 SNORA31.25-201ENST00000517242 134 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.08□□□□□ -2.08
PTCH1Q13635 MIR4528-201ENST00000577763 90 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PTCH1Q13635 AC078795.2-201ENST00000602835 1252 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 AC138749.5-201ENST00000611461 208 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 Z99129.1-201ENST00000612510 255 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 AC116165.2-201ENST00000616705 206 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 AC024940.5-201ENST00000622889 474 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PTCH1Q13635 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.08□□□□□ -2.08
PTCH1Q13635 RNU6-533P-201ENST00000384144 107 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 RNU6-348P-201ENST00000384386 107 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 RNU6-297P-201ENST00000384636 107 ntBASIC2.08□□□□□ -2.08
PTCH1Q13635 Y_RNA.608-201ENST00000410647 95 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms