Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC244098.3-201ENST00000424803 96 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 YWHAZP8-201ENST00000436935 731 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC-0.59□□□□□ -2.5
TFF3Q07654 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.59□□□□□ -2.5
TFF3Q07654 MTND2P4-201ENST00000445034 1004 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.59□□□□□ -2.5
TFF3Q07654 COX7A2P2-201ENST00000505291 250 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 AC025465.4-201ENST00000513422 638 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 RNU6-863P-201ENST00000515989 104 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 AC022861.1-201ENST00000522981 663 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.59□□□□□ -2.5
TFF3Q07654 AC022523.2-201ENST00000561045 150 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 RN7SL660P-201ENST00000614852 299 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 AC100810.6-201ENST00000638068 285 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 AL390237.1-201ENST00000404226 1415 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 RNU6-815P-201ENST00000384080 113 ntBASIC-0.6□□□□□ -2.51
TFF3Q07654 MIR153-2-201ENST00000385225 87 ntBASIC-0.6□□□□□ -2.51
TFF3Q07654 MT-TQ-201ENST00000387372 72 ntBASIC-0.6□□□□□ -2.51
TFF3Q07654 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.6□□□□□ -2.51
TFF3Q07654 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.6□□□□□ -2.51
TFF3Q07654 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.6□□□□□ -2.51
TFF3Q07654 RPL36P19-201ENST00000430744 301 ntBASIC-0.6□□□□□ -2.51
TFF3Q07654 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.6□□□□□ -2.51
TFF3Q07654 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-0.6□□□□□ -2.51
TFF3Q07654 AL031313.1-201ENST00000448435 256 ntBASIC-0.6□□□□□ -2.51
TFF3Q07654 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-0.6□□□□□ -2.51
TFF3Q07654 AC124947.2-202ENST00000552735 133 ntBASIC-0.6□□□□□ -2.51
TFF3Q07654 MIR5094-201ENST00000578766 85 ntBASIC-0.6□□□□□ -2.51
TFF3Q07654 AC091152.3-201ENST00000604227 325 ntBASIC-0.6□□□□□ -2.51
TFF3Q07654 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.6□□□□□ -2.51
TFF3Q07654 AF129408.1-201ENST00000608767 431 ntBASIC-0.6□□□□□ -2.51
TFF3Q07654 MTND5P32-201ENST00000560711 1802 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 RNU6-1251P-201ENST00000364502 107 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 SNORA36.2-201ENST00000384004 127 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 MIR520F-201ENST00000384824 87 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 MIR135A2-201ENST00000384854 100 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.61□□□□□ -2.51
TFF3Q07654 AC073261.1-201ENST00000429409 121 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 RAC1P7-201ENST00000445367 377 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.61□□□□□ -2.51
TFF3Q07654 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.61□□□□□ -2.51
TFF3Q07654 AC010469.2-201ENST00000496412 480 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 RNA5SP67-201ENST00000516422 131 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 AP000763.2-201ENST00000540641 163 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-0.61□□□□□ -2.51
TFF3Q07654 AC009712.1-201ENST00000564938 316 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 AC015688.2-201ENST00000584523 262 ntBASIC-0.61□□□□□ -2.51
TFF3Q07654 RNU6-884P-201ENST00000363889 107 ntBASIC-0.62□□□□□ -2.51
TFF3Q07654 MIR643-201ENST00000385267 97 ntBASIC-0.62□□□□□ -2.51
TFF3Q07654 SNORD65-201ENST00000391079 73 ntBASIC-0.62□□□□□ -2.51
TFF3Q07654 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC-0.62□□□□□ -2.51
TFF3Q07654 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.62□□□□□ -2.51
TFF3Q07654 AL441985.1-201ENST00000457727 251 ntBASIC-0.62□□□□□ -2.51
TFF3Q07654 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.62□□□□□ -2.51
TFF3Q07654 AC048334.1-201ENST00000477975 159 ntBASIC-0.62□□□□□ -2.51
TFF3Q07654 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.62□□□□□ -2.51
TFF3Q07654 AC005261.5-201ENST00000596280 355 ntBASIC-0.62□□□□□ -2.51
TFF3Q07654 AL355816.2-201ENST00000610049 647 ntBASIC-0.62□□□□□ -2.51
TFF3Q07654 uc_338.36-201ENST00000622331 158 ntBASIC-0.62□□□□□ -2.51
TFF3Q07654 AC017037.3-201ENST00000625016 472 ntBASIC-0.62□□□□□ -2.51
TFF3Q07654 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.62□□□□□ -2.51
TFF3Q07654 RNU6-23P-201ENST00000363283 107 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 SSR1P1-201ENST00000407630 814 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 AL353621.1-201ENST00000418219 243 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 BTF3P11-201ENST00000426582 477 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.63□□□□□ -2.51
TFF3Q07654 AL353706.1-201ENST00000436728 494 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 AC097499.1-201ENST00000444277 208 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.63□□□□□ -2.51
TFF3Q07654 U7.7-201ENST00000459276 60 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.63□□□□□ -2.51
TFF3Q07654 RNU6-1308P-201ENST00000516817 103 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 RN7SKP258-201ENST00000517151 304 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 AC079598.5-201ENST00000547460 117 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 MIR3169-201ENST00000578032 83 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 AC087685.1-201ENST00000587507 141 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 SNRPGP20-201ENST00000604477 205 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.63□□□□□ -2.51
TFF3Q07654 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.63□□□□□ -2.51
TFF3Q07654 AC245060.5-201ENST00000610778 3293 ntBASIC-0.63□□□□□ -2.51
TFF3Q07654 RNY1P8-201ENST00000383970 114 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 MIR548B-201ENST00000385247 97 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 RNU6-177P-201ENST00000411257 104 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 AC138623.1-201ENST00000418060 216 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC-0.64□□□□□ -2.51
TFF3Q07654 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 AC099677.2-201ENST00000436385 175 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 AL008629.1-201ENST00000438615 184 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 NFU1P2-201ENST00000448700 469 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.64□□□□□ -2.51
TFF3Q07654 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 RPS26P48-201ENST00000491713 339 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 RNU2-12P-201ENST00000517216 168 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms