Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC022418.1-201ENST00000624118 445 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CKAP4Q07065 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.97□□□□□ -2.09
CKAP4Q07065 MIR208A-201ENST00000362287 71 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 Y_RNA.279-201ENST00000364763 95 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 RNU2-3P-201ENST00000410144 191 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 RNU2-20P-201ENST00000410425 191 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 RNU6-1148P-201ENST00000410992 104 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 RNU6-607P-201ENST00000411283 108 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 RPL21P90-201ENST00000415692 466 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.97□□□□□ -2.09
CKAP4Q07065 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.97□□□□□ -2.09
CKAP4Q07065 AC236972.1-201ENST00000433225 199 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 AL121601.2-201ENST00000438019 707 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 MTCO2P3-201ENST00000442543 421 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 GPM6BP3-201ENST00000442797 145 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 MTND4P18-201ENST00000447010 465 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 DYNLL1P5-201ENST00000467158 270 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 AC096576.1-201ENST00000489014 359 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 AC018710.1-201ENST00000506509 158 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.97□□□□□ -2.09
CKAP4Q07065 RNU7-193P-201ENST00000516723 65 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.97□□□□□ -2.09
CKAP4Q07065 EIF4BP1-201ENST00000554881 351 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 MIR548S-201ENST00000581352 82 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 MIR3941-201ENST00000582572 103 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 BNIP3P10-201ENST00000605360 577 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 RMST_4.1-201ENST00000616886 107 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 AC103705.1-201ENST00000619013 241 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.97□□□□□ -2.09
CKAP4Q07065 AC090617.10-201ENST00000624308 134 ntBASIC1.97□□□□□ -2.09
CKAP4Q07065 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.97□□□□□ -2.09
CKAP4Q07065 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
CKAP4Q07065 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.96□□□□□ -2.1
CKAP4Q07065 MIR412-201ENST00000362142 91 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 Y_RNA.72-201ENST00000362894 103 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 Y_RNA.86-201ENST00000363020 111 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 RNU6-166P-201ENST00000384371 107 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CKAP4Q07065 RNU6-876P-201ENST00000391295 104 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 RNU4-26P-201ENST00000410270 107 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 Y_RNA.615-201ENST00000410769 117 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 POLHP1-201ENST00000411806 470 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.96□□□□□ -2.1
CKAP4Q07065 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.96□□□□□ -2.1
CKAP4Q07065 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.96□□□□□ -2.1
CKAP4Q07065 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.96□□□□□ -2.1
CKAP4Q07065 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.96□□□□□ -2.1
CKAP4Q07065 AC026801.1-201ENST00000497178 464 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 MTND3P25-201ENST00000509243 135 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 FAM206BP-201ENST00000510179 541 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 RNU1-86P-201ENST00000516108 154 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 RNU6-1038P-201ENST00000516516 104 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 RNU1-107P-201ENST00000516617 154 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.96□□□□□ -2.1
CKAP4Q07065 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.96□□□□□ -2.1
CKAP4Q07065 AC023050.3-201ENST00000541142 333 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 PSMA3P-201ENST00000555485 635 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.96□□□□□ -2.1
CKAP4Q07065 AC106782.4-201ENST00000568264 210 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 MIR5571-201ENST00000577998 113 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 MIR3618-201ENST00000580330 88 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 BNIP3P25-201ENST00000596023 559 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 SNRPGP19-201ENST00000603826 189 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.96□□□□□ -2.1
CKAP4Q07065 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.96□□□□□ -2.1
CKAP4Q07065 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CKAP4Q07065 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CKAP4Q07065 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.95□□□□□ -2.1
CKAP4Q07065 SNORD3E-201ENST00000362899 217 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 Y_RNA.100-201ENST00000363141 102 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 SNORA5B-201ENST00000363786 132 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 RNU6-384P-201ENST00000364900 104 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 Y_RNA.480-201ENST00000384364 102 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 MIR491-201ENST00000384877 84 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 RNU4-53P-201ENST00000410828 140 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 RPL26P27-201ENST00000414397 437 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 CYCSP33-201ENST00000414485 327 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 RPL21P111-201ENST00000418453 477 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.95□□□□□ -2.1
CKAP4Q07065 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.95□□□□□ -2.1
CKAP4Q07065 AL353572.1-201ENST00000442490 417 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 PRPS1P1-201ENST00000445305 876 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 MTND3P10-201ENST00000450967 341 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.95□□□□□ -2.1
CKAP4Q07065 PPP1R2P5-201ENST00000457256 603 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 RNU7-66P-201ENST00000459469 62 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 AC011005.2-201ENST00000487324 359 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 AC010486.1-201ENST00000511793 424 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 RNU6-189P-201ENST00000516120 101 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 RNU1-103P-201ENST00000516502 125 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 MIR514B-201ENST00000516774 80 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 SNORA31.19-201ENST00000517079 126 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 RNU6-1314P-201ENST00000517139 104 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 SNORA25.17-201ENST00000517184 124 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 AL121579.1-201ENST00000555129 305 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 MIR4419B-201ENST00000577260 68 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 VN1R80P-201ENST00000597126 338 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 AL355598.1-201ENST00000604169 202 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 AC021646.1-201ENST00000605469 484 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms