Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC140059.1-201ENST00000489238 361 ntBASIC4.09□□□□□ -1.75
SOX4Q06945 AC097462.2-201ENST00000504623 481 ntBASIC4.09□□□□□ -1.75
SOX4Q06945 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.09□□□□□ -1.75
SOX4Q06945 RNU6-313P-201ENST00000516317 112 ntBASIC4.09□□□□□ -1.75
SOX4Q06945 AC090281.1-201ENST00000523019 276 ntBASIC4.09□□□□□ -1.75
SOX4Q06945 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.09□□□□□ -1.75
SOX4Q06945 AC069240.1-201ENST00000548774 375 ntBASIC4.09□□□□□ -1.75
SOX4Q06945 MIR5692C2-201ENST00000577959 77 ntBASIC4.09□□□□□ -1.75
SOX4Q06945 MIR5571-201ENST00000577998 113 ntBASIC4.09□□□□□ -1.75
SOX4Q06945 AL357075.2-201ENST00000614906 189 ntBASIC4.09□□□□□ -1.75
SOX4Q06945 AC091895.1-201ENST00000624494 256 ntBASIC4.09□□□□□ -1.75
SOX4Q06945 snoU18.1-201ENST00000629629 71 ntBASIC4.09□□□□□ -1.75
SOX4Q06945 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SOX4Q06945 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SOX4Q06945 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SOX4Q06945 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SOX4Q06945 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SOX4Q06945 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SOX4Q06945 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SOX4Q06945 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX4Q06945 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX4Q06945 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX4Q06945 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX4Q06945 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.08□□□□□ -1.76
SOX4Q06945 RNU6-653P-201ENST00000363074 106 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 SNORD115-8-201ENST00000363856 82 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 SNORD115-38-201ENST00000365037 82 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 RNU6-211P-201ENST00000384047 107 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 RNU6-417P-201ENST00000384712 107 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 RNU6-131P-201ENST00000391144 107 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 RNA5SP306-201ENST00000411087 107 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 AC007969.2-201ENST00000441891 191 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX4Q06945 GPM6BP3-201ENST00000442797 145 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 AC005042.3-201ENST00000453230 174 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX4Q06945 SNORD108-201ENST00000459332 71 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 HSPE1P4-201ENST00000550617 308 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 AC090877.1-201ENST00000561418 344 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 AC055872.1-201ENST00000570978 278 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 MIR5187-201ENST00000583479 76 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 SNORA62.6-201ENST00000606322 83 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 AC048347.1-201ENST00000624621 427 ntBASIC4.08□□□□□ -1.76
SOX4Q06945 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.08□□□□□ -1.76
SOX4Q06945 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SOX4Q06945 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SOX4Q06945 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SOX4Q06945 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX4Q06945 UBE3AP2-201ENST00000429033 2259 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 AL109809.4-201ENST00000603520 2185 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 MFSD8-236ENST00000641509 4050 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SOX4Q06945 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SOX4Q06945 RNU6-449P-201ENST00000383914 107 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 Y_RNA.571-201ENST00000384753 98 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 Y_RNA.595-201ENST00000410403 105 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 AC074117.2-201ENST00000417130 397 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX4Q06945 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX4Q06945 RPS4XP22-201ENST00000480755 780 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SOX4Q06945 HMGB3P3-201ENST00000510526 400 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 AC026726.1-201ENST00000512859 601 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX4Q06945 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX4Q06945 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX4Q06945 AC019159.1-201ENST00000605094 187 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 FTX_3.1-201ENST00000610451 147 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 AC068831.7-201ENST00000616954 363 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SOX4Q06945 U2.21-201ENST00000637295 81 ntBASIC4.07□□□□□ -1.76
SOX4Q06945 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
SOX4Q06945 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SOX4Q06945 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX4Q06945 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX4Q06945 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX4Q06945 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SOX4Q06945 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX4Q06945 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX4Q06945 RNA5SP51-201ENST00000364750 119 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 SNORA72.2-201ENST00000365028 127 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 Y_RNA.400-201ENST00000383963 111 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 Y_RNA.488-201ENST00000384403 102 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 Y_RNA.568-201ENST00000384742 113 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 MIR544A-201ENST00000384855 91 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 AC138623.1-201ENST00000418060 216 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 AL162725.1-201ENST00000435405 301 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SOX4Q06945 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX4Q06945 IFNA11P-201ENST00000446352 526 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.06□□□□□ -1.76
SOX4Q06945 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX4Q06945 RNU6-191P-201ENST00000516295 94 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 AC026403.1-201ENST00000518938 295 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SOX4Q06945 CR383656.8-201ENST00000549046 145 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX4Q06945 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX4Q06945 SNORA51-201ENST00000606420 132 ntBASIC4.06□□□□□ -1.76
SOX4Q06945 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms