Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 ZNF299P-201ENST00000406845 1804 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP1Q00587 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP1Q00587 RNA5SP383-201ENST00000362934 120 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 RNY1P16-201ENST00000363063 111 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 SNORA54-201ENST00000384281 123 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 RNU6-1160P-201ENST00000384546 104 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AP000275.1-201ENST00000411943 390 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AC245291.1-201ENST00000419501 328 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 NUP35P1-201ENST00000422734 947 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AC008267.5-201ENST00000424928 265 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AC243964.1-201ENST00000441814 261 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 RPS12P18-201ENST00000442381 270 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.35□□□□□ -1.87
CDC42EP1Q00587 SCARNA13-201ENST00000516672 275 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 SNORA31.21-201ENST00000517180 77 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AC009812.2-201ENST00000517657 457 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.35□□□□□ -1.87
CDC42EP1Q00587 SUB1P3-201ENST00000564581 315 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.35□□□□□ -1.87
CDC42EP1Q00587 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AC009318.2-201ENST00000610917 651 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AC007485.1-201ENST00000616755 206 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 MIR3529-201ENST00000637713 78 ntBASIC3.35□□□□□ -1.87
CDC42EP1Q00587 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDC42EP1Q00587 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.34□□□□□ -1.87
CDC42EP1Q00587 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDC42EP1Q00587 SNORD50.1-201ENST00000362987 71 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 AP002088.1-201ENST00000382740 395 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 Y_RNA.496-201ENST00000384444 101 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.34□□□□□ -1.87
CDC42EP1Q00587 MRPS18CP6-201ENST00000423587 223 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.34□□□□□ -1.87
CDC42EP1Q00587 AC107083.1-201ENST00000439643 279 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 AC099799.1-201ENST00000439809 192 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.34□□□□□ -1.87
CDC42EP1Q00587 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 RNU5F-8P-201ENST00000515941 111 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 RNU6-1045P-201ENST00000516321 107 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 RNU6-711P-201ENST00000517255 106 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 AC104027.1-201ENST00000521887 300 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.34□□□□□ -1.87
CDC42EP1Q00587 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.34□□□□□ -1.87
CDC42EP1Q00587 AL355802.3-201ENST00000607571 545 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.34□□□□□ -1.87
CDC42EP1Q00587 SCARNA15.3-201ENST00000626315 122 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 SCARNA4.1-201ENST00000628597 123 ntBASIC3.34□□□□□ -1.87
CDC42EP1Q00587 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
CDC42EP1Q00587 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.34□□□□□ -1.88
CDC42EP1Q00587 MTND4P1-201ENST00000457501 1466 ntBASIC3.34□□□□□ -1.88
CDC42EP1Q00587 AC009541.1-201ENST00000438279 2662 ntBASIC3.34□□□□□ -1.88
CDC42EP1Q00587 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDC42EP1Q00587 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.34□□□□□ -1.88
CDC42EP1Q00587 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42EP1Q00587 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.33□□□□□ -1.88
CDC42EP1Q00587 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42EP1Q00587 AC096644.4-201ENST00000563417 2912 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 RNU6-99P-201ENST00000364721 107 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 Y_RNA.364-201ENST00000365532 101 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 AC117470.1-201ENST00000381974 330 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 RNY1P14-201ENST00000384426 108 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 SNORD67-201ENST00000390833 111 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 RNA5SP274-201ENST00000410484 108 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 AL160004.2-201ENST00000432935 350 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.33□□□□□ -1.88
CDC42EP1Q00587 GSTA11P-201ENST00000452866 669 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.33□□□□□ -1.88
CDC42EP1Q00587 AC105758.1-201ENST00000506038 399 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 SNORA25.10-201ENST00000515926 124 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.33□□□□□ -1.88
CDC42EP1Q00587 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.33□□□□□ -1.88
CDC42EP1Q00587 EIF4BP1-201ENST00000554881 351 ntBASIC3.33□□□□□ -1.88
CDC42EP1Q00587 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.33□□□□□ -1.88
CDC42EP1Q00587 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.33□□□□□ -1.88
CDC42EP1Q00587 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42EP1Q00587 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDC42EP1Q00587 SNORA63C-201ENST00000364578 129 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 Y_RNA.314-201ENST00000365114 102 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 RNU6-784P-201ENST00000384330 106 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 RNU6-738P-201ENST00000384531 106 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 RNU6-19P-201ENST00000384718 107 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.32□□□□□ -1.88
CDC42EP1Q00587 PTGES3P4-201ENST00000426243 356 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.32□□□□□ -1.88
CDC42EP1Q00587 SETP5-201ENST00000437270 562 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 AC079354.2-201ENST00000453523 154 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 AC107626.1-201ENST00000471084 183 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 SNORA64.4-201ENST00000516632 81 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 SNORD19.2-201ENST00000516978 73 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 SNORA31.23-201ENST00000517219 133 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 NDUFB9P3-201ENST00000521269 501 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 AP000889.1-201ENST00000530968 660 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 AC023442.1-201ENST00000531247 422 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 MIR5696-201ENST00000578474 85 ntBASIC3.32□□□□□ -1.88
CDC42EP1Q00587 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.32□□□□□ -1.88
CDC42EP1Q00587 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.32□□□□□ -1.88
CDC42EP1Q00587 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms