Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RNU6-637P-201ENST00000384050 107 ntBASIC0.09□□□□□ -2.4
UBA52P62987 MIR329-2-201ENST00000385029 84 ntBASIC0.09□□□□□ -2.4
UBA52P62987 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.09□□□□□ -2.4
UBA52P62987 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.09□□□□□ -2.4
UBA52P62987 VN1R10P-201ENST00000447106 875 ntBASIC0.09□□□□□ -2.4
UBA52P62987 AC097473.1-201ENST00000508142 408 ntBASIC0.09□□□□□ -2.4
UBA52P62987 SNORA68.3-201ENST00000515906 83 ntBASIC0.09□□□□□ -2.4
UBA52P62987 RNU5A-4P-201ENST00000516588 111 ntBASIC0.09□□□□□ -2.4
UBA52P62987 AC023824.3-201ENST00000569003 562 ntBASIC0.09□□□□□ -2.4
UBA52P62987 AL590229.1-201ENST00000603497 542 ntBASIC0.09□□□□□ -2.4
UBA52P62987 AC091946.2-201ENST00000606105 291 ntBASIC0.09□□□□□ -2.4
UBA52P62987 AC093788.1-201ENST00000609356 927 ntBASIC0.09□□□□□ -2.4
UBA52P62987 AC017083.3-201ENST00000609955 700 ntBASIC0.09□□□□□ -2.4
UBA52P62987 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.09□□□□□ -2.4
UBA52P62987 LINC02555-201ENST00000563933 1951 ntBASIC0.08□□□□□ -2.4
UBA52P62987 SNORA63D-201ENST00000364359 132 ntBASIC0.08□□□□□ -2.4
UBA52P62987 RNU6-1237P-201ENST00000384777 107 ntBASIC0.08□□□□□ -2.4
UBA52P62987 RNU2-28P-201ENST00000410457 189 ntBASIC0.08□□□□□ -2.4
UBA52P62987 AC092423.1-201ENST00000430165 186 ntBASIC0.08□□□□□ -2.4
UBA52P62987 GPM6BP2-201ENST00000432046 144 ntBASIC0.08□□□□□ -2.4
UBA52P62987 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.08□□□□□ -2.4
UBA52P62987 MTCYBP15-201ENST00000433123 1127 ntBASIC0.08□□□□□ -2.4
UBA52P62987 MTND2P21-201ENST00000436242 1042 ntBASIC0.08□□□□□ -2.4
UBA52P62987 AL008629.1-201ENST00000438615 184 ntBASIC0.08□□□□□ -2.4
UBA52P62987 GPM6BP1-201ENST00000446387 144 ntBASIC0.08□□□□□ -2.4
UBA52P62987 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.08□□□□□ -2.4
UBA52P62987 RN7SKP12-201ENST00000516275 143 ntBASIC0.08□□□□□ -2.4
UBA52P62987 RNA5SP481-201ENST00000516814 122 ntBASIC0.08□□□□□ -2.4
UBA52P62987 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.08□□□□□ -2.4
UBA52P62987 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.08□□□□□ -2.4
UBA52P62987 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.08□□□□□ -2.4
UBA52P62987 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.08□□□□□ -2.4
UBA52P62987 HMGB1P33-201ENST00000563485 527 ntBASIC0.08□□□□□ -2.4
UBA52P62987 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
UBA52P62987 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
UBA52P62987 AC007792.1-201ENST00000623023 402 ntBASIC0.08□□□□□ -2.4
UBA52P62987 AC090617.9-201ENST00000623751 147 ntBASIC0.08□□□□□ -2.4
UBA52P62987 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
UBA52P62987 MIRLET7D-201ENST00000362263 87 ntBASIC0.07□□□□□ -2.4
UBA52P62987 RNU6-529P-201ENST00000363383 104 ntBASIC0.07□□□□□ -2.4
UBA52P62987 RNU6-819P-201ENST00000364116 107 ntBASIC0.07□□□□□ -2.4
UBA52P62987 RNU6-40P-201ENST00000384254 107 ntBASIC0.07□□□□□ -2.4
UBA52P62987 RNU6-1005P-201ENST00000384519 107 ntBASIC0.07□□□□□ -2.4
UBA52P62987 RNU6-331P-201ENST00000384724 107 ntBASIC0.07□□□□□ -2.4
UBA52P62987 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
UBA52P62987 RNU6-1300P-201ENST00000391046 108 ntBASIC0.07□□□□□ -2.4
UBA52P62987 MIR942-201ENST00000401111 86 ntBASIC0.07□□□□□ -2.4
UBA52P62987 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
UBA52P62987 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.07□□□□□ -2.4
UBA52P62987 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.07□□□□□ -2.4
UBA52P62987 AC099677.2-201ENST00000436385 175 ntBASIC0.07□□□□□ -2.4
UBA52P62987 MTND1P30-201ENST00000441241 901 ntBASIC0.07□□□□□ -2.4
UBA52P62987 MTATP6P30-201ENST00000443540 664 ntBASIC0.07□□□□□ -2.4
UBA52P62987 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.07□□□□□ -2.4
UBA52P62987 MTND5P13-201ENST00000513046 1079 ntBASIC0.07□□□□□ -2.4
UBA52P62987 RNA5SP476-201ENST00000516613 103 ntBASIC0.07□□□□□ -2.4
UBA52P62987 AC104417.1-201ENST00000523974 751 ntBASIC0.07□□□□□ -2.4
UBA52P62987 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.07□□□□□ -2.4
UBA52P62987 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.07□□□□□ -2.4
UBA52P62987 AC136618.2-201ENST00000575091 400 ntBASIC0.07□□□□□ -2.4
UBA52P62987 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
UBA52P62987 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.07□□□□□ -2.4
UBA52P62987 AC090330.1-201ENST00000588646 764 ntBASIC0.07□□□□□ -2.4
UBA52P62987 AC146944.4-201ENST00000602697 718 ntBASIC0.07□□□□□ -2.4
UBA52P62987 BNIP3P31-201ENST00000604515 566 ntBASIC0.07□□□□□ -2.4
UBA52P62987 AC069114.2-201ENST00000604699 304 ntBASIC0.07□□□□□ -2.4
UBA52P62987 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.07□□□□□ -2.4
UBA52P62987 AC092106.3-201ENST00000611308 722 ntBASIC0.07□□□□□ -2.4
UBA52P62987 MIR6759-201ENST00000638110 65 ntBASIC0.07□□□□□ -2.4
UBA52P62987 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
UBA52P62987 RNU6-898P-201ENST00000365627 104 ntBASIC0.06□□□□□ -2.4
UBA52P62987 AF228730.1-201ENST00000397972 663 ntBASIC0.06□□□□□ -2.4
UBA52P62987 RNU6-1054P-201ENST00000411293 104 ntBASIC0.06□□□□□ -2.4
UBA52P62987 MTATP6P27-201ENST00000416987 621 ntBASIC0.06□□□□□ -2.4
UBA52P62987 MTND5P14-201ENST00000441481 1267 ntBASIC0.06□□□□□ -2.4
UBA52P62987 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.06□□□□□ -2.4
UBA52P62987 AC020550.1-201ENST00000447385 163 ntBASIC0.06□□□□□ -2.4
UBA52P62987 AC048334.1-201ENST00000477975 159 ntBASIC0.06□□□□□ -2.4
UBA52P62987 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.06□□□□□ -2.4
UBA52P62987 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.06□□□□□ -2.4
UBA52P62987 MIR4305-201ENST00000583252 102 ntBASIC0.06□□□□□ -2.4
UBA52P62987 AL451064.1-201ENST00000607718 471 ntBASIC0.06□□□□□ -2.4
UBA52P62987 AC008759.3-201ENST00000613300 508 ntBASIC0.06□□□□□ -2.4
UBA52P62987 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.06□□□□□ -2.4
UBA52P62987 AC010615.1-201ENST00000594254 1764 ntBASIC0.06□□□□□ -2.4
UBA52P62987 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.05□□□□□ -2.4
UBA52P62987 MIR340-201ENST00000362125 95 ntBASIC0.05□□□□□ -2.4
UBA52P62987 Y_RNA.274-201ENST00000364714 101 ntBASIC0.05□□□□□ -2.4
UBA52P62987 RNU6-1335P-201ENST00000365426 107 ntBASIC0.05□□□□□ -2.4
UBA52P62987 RPL23AP95-201ENST00000426806 265 ntBASIC0.05□□□□□ -2.4
UBA52P62987 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.05□□□□□ -2.4
UBA52P62987 AC092170.1-201ENST00000440211 356 ntBASIC0.05□□□□□ -2.4
UBA52P62987 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.05□□□□□ -2.4
UBA52P62987 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.05□□□□□ -2.4
UBA52P62987 AC013828.1-201ENST00000481845 158 ntBASIC0.05□□□□□ -2.4
UBA52P62987 RPS26P48-201ENST00000491713 339 ntBASIC0.05□□□□□ -2.4
UBA52P62987 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.05□□□□□ -2.4
UBA52P62987 AC118282.2-201ENST00000508739 374 ntBASIC0.05□□□□□ -2.4
UBA52P62987 AC010587.2-201ENST00000511727 448 ntBASIC0.05□□□□□ -2.4
UBA52P62987 AL442163.3-201ENST00000554110 156 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms