Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 U2.1-201ENST00000618978 145 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 AC097372.5-201ENST00000623665 376 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 AL137790.1-201ENST00000634283 177 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
HERVK_113P62684 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HERVK_113P62684 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HERVK_113P62684 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HERVK_113P62684 PWAR6-201ENST00000552334 4618 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 FAM35BP-202ENST00000497389 3337 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
HERVK_113P62684 AC017071.1-201ENST00000564407 2204 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HERVK_113P62684 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HERVK_113P62684 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HERVK_113P62684 Y_RNA.188-201ENST00000363952 111 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 Z98749.2-208ENST00000381646 500 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 SNORA69.1-201ENST00000390904 137 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.71□□□□□ -1.82
HERVK_113P62684 TMEM167AP1-201ENST00000423409 219 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 CBX3P6-201ENST00000430257 527 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.71□□□□□ -1.82
HERVK_113P62684 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.71□□□□□ -1.82
HERVK_113P62684 DYNLT3P2-201ENST00000442517 295 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 AC124916.1-201ENST00000444020 547 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 OSTCP8-201ENST00000445117 448 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 RPL37P4-201ENST00000448908 268 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.71□□□□□ -1.82
HERVK_113P62684 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HERVK_113P62684 RPS29P27-201ENST00000463711 170 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 RNU1-61P-201ENST00000516107 151 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 SNORA31.18-201ENST00000517043 134 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 AC107934.2-201ENST00000518653 310 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 AC104027.1-201ENST00000521887 300 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.71□□□□□ -1.82
HERVK_113P62684 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.71□□□□□ -1.82
HERVK_113P62684 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.71□□□□□ -1.82
HERVK_113P62684 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.71□□□□□ -1.82
HERVK_113P62684 MIR5701-3-201ENST00000578890 82 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 MIR3668-201ENST00000582138 75 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 UBL5P2-201ENST00000583788 219 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 MIR5701-1-201ENST00000585138 82 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.71□□□□□ -1.82
HERVK_113P62684 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.71□□□□□ -1.82
HERVK_113P62684 MIR5701-2-201ENST00000615634 82 ntBASIC3.71□□□□□ -1.82
HERVK_113P62684 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HERVK_113P62684 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.71□□□□□ -1.82
HERVK_113P62684 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HERVK_113P62684 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HERVK_113P62684 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.7□□□□□ -1.82
HERVK_113P62684 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HERVK_113P62684 AL353746.1-201ENST00000566293 6881 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 SNORD6-201ENST00000365444 73 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 RNU1-73P-201ENST00000383971 164 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 RNU6-1222P-201ENST00000384615 107 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 RNU6-713P-201ENST00000384761 107 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 SAR1AP2-201ENST00000392696 594 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 RNA5SP229-201ENST00000410809 99 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 AC006026.2-201ENST00000457376 180 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 HMGN1P18-201ENST00000457642 277 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 RPL7P47-201ENST00000497299 556 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 SNORA43.2-201ENST00000516652 128 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 RNU6-1271P-201ENST00000517049 105 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 AP004607.1-201ENST00000524456 203 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 AL590705.4-201ENST00000532209 134 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.7□□□□□ -1.82
HERVK_113P62684 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.7□□□□□ -1.82
HERVK_113P62684 MTND4LP5-201ENST00000605152 292 ntBASIC3.7□□□□□ -1.82
HERVK_113P62684 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HERVK_113P62684 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HERVK_113P62684 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HERVK_113P62684 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HERVK_113P62684 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.69□□□□□ -1.82
HERVK_113P62684 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HERVK_113P62684 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HERVK_113P62684 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HERVK_113P62684 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HERVK_113P62684 RNU6-778P-201ENST00000363269 103 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 BTF3L4P2-201ENST00000392798 346 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 RPS29P13-201ENST00000402041 169 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 RNA5SP293-201ENST00000410527 113 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 USP9YP16-201ENST00000430287 407 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 MTCO3P29-201ENST00000432119 779 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 AC108059.2-201ENST00000434626 151 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.69□□□□□ -1.82
HERVK_113P62684 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.69□□□□□ -1.82
HERVK_113P62684 PCNPP5-201ENST00000452246 481 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 MTATP6P7-201ENST00000453315 681 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 AC079354.2-201ENST00000453523 154 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 USP9YP23-201ENST00000455085 407 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.69□□□□□ -1.82
HERVK_113P62684 RPL23AP62-201ENST00000463396 453 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 RNU6-928P-201ENST00000516876 104 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 SCARNA20.6-201ENST00000517251 106 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.69□□□□□ -1.82
HERVK_113P62684 MYL12BP1-201ENST00000569826 507 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 RPS29P30-201ENST00000600975 111 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 AC007496.3-201ENST00000624987 3443 ntBASIC3.69□□□□□ -1.82
HERVK_113P62684 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HERVK_113P62684 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms