Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNU5F-2P-201ENST00000516066 82 ntBASIC0.39□□□□□ -2.35
LSM3P62310 RNU4-54P-201ENST00000516428 129 ntBASIC0.39□□□□□ -2.35
LSM3P62310 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AL590705.4-201ENST00000532209 134 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AL121579.1-201ENST00000555129 305 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.39□□□□□ -2.35
LSM3P62310 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.39□□□□□ -2.35
LSM3P62310 AC133485.1-201ENST00000567176 124 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AC138907.6-201ENST00000568401 126 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.39□□□□□ -2.35
LSM3P62310 AC090186.1-201ENST00000605991 572 ntBASIC0.39□□□□□ -2.35
LSM3P62310 RNU6-87P-201ENST00000607561 108 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AC022893.3-201ENST00000607665 437 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AC009229.3-201ENST00000608056 282 ntBASIC0.39□□□□□ -2.35
LSM3P62310 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.39□□□□□ -2.35
LSM3P62310 AC083806.3-201ENST00000614016 455 ntBASIC0.39□□□□□ -2.35
LSM3P62310 PCMTD1P7-201ENST00000634506 357 ntBASIC0.39□□□□□ -2.35
LSM3P62310 MTND5P42-201ENST00000637720 498 ntBASIC0.39□□□□□ -2.35
LSM3P62310 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
LSM3P62310 RNU4-79P-201ENST00000362764 141 ntBASIC0.38□□□□□ -2.35
LSM3P62310 SNORD56.1-201ENST00000362913 68 ntBASIC0.38□□□□□ -2.35
LSM3P62310 RNU6-207P-201ENST00000384137 107 ntBASIC0.38□□□□□ -2.35
LSM3P62310 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.38□□□□□ -2.35
LSM3P62310 RPS3AP37-201ENST00000419176 745 ntBASIC0.38□□□□□ -2.35
LSM3P62310 USP9YP14-201ENST00000430663 563 ntBASIC0.38□□□□□ -2.35
LSM3P62310 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.38□□□□□ -2.35
LSM3P62310 RPS26P45-201ENST00000471748 340 ntBASIC0.38□□□□□ -2.35
LSM3P62310 AC079140.3-201ENST00000511111 550 ntBASIC0.38□□□□□ -2.35
LSM3P62310 RN7SKP219-201ENST00000516825 296 ntBASIC0.38□□□□□ -2.35
LSM3P62310 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.38□□□□□ -2.35
LSM3P62310 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.38□□□□□ -2.35
LSM3P62310 BNIP3P8-201ENST00000597863 560 ntBASIC0.38□□□□□ -2.35
LSM3P62310 AC023158.2-201ENST00000614876 543 ntBASIC0.38□□□□□ -2.35
LSM3P62310 MIR6767-201ENST00000637302 66 ntBASIC0.38□□□□□ -2.35
LSM3P62310 AC068700.1-201ENST00000565862 3754 ntBASIC0.38□□□□□ -2.35
LSM3P62310 RNA5SP499-201ENST00000363982 119 ntBASIC0.37□□□□□ -2.35
LSM3P62310 RNU6-1019P-201ENST00000364424 107 ntBASIC0.37□□□□□ -2.35
LSM3P62310 Y_RNA.363-201ENST00000365529 113 ntBASIC0.37□□□□□ -2.35
LSM3P62310 RNU6-1176P-201ENST00000390955 107 ntBASIC0.37□□□□□ -2.35
LSM3P62310 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
LSM3P62310 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
LSM3P62310 RNA5SP390-201ENST00000410191 113 ntBASIC0.37□□□□□ -2.35
LSM3P62310 AC011233.1-201ENST00000422812 283 ntBASIC0.37□□□□□ -2.35
LSM3P62310 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
LSM3P62310 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
LSM3P62310 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.37□□□□□ -2.35
LSM3P62310 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.37□□□□□ -2.35
LSM3P62310 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.37□□□□□ -2.35
LSM3P62310 RPL23AP94-201ENST00000512518 302 ntBASIC0.37□□□□□ -2.35
LSM3P62310 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.37□□□□□ -2.35
LSM3P62310 MIR1273C-201ENST00000578669 77 ntBASIC0.37□□□□□ -2.35
LSM3P62310 AC098848.2-201ENST00000588023 330 ntBASIC0.37□□□□□ -2.35
LSM3P62310 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
LSM3P62310 AC104465.1-201ENST00000611365 139 ntBASIC0.37□□□□□ -2.35
LSM3P62310 AC243994.1-201ENST00000618627 109 ntBASIC0.37□□□□□ -2.35
LSM3P62310 AC104985.3-201ENST00000623479 597 ntBASIC0.37□□□□□ -2.35
LSM3P62310 MIR520E-201ENST00000384867 87 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AL603865.2-201ENST00000401679 213 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AL031577.2-201ENST00000404133 280 ntBASIC0.36□□□□□ -2.35
LSM3P62310 Y_RNA.623-201ENST00000411128 95 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AL359704.1-201ENST00000411586 781 ntBASIC0.36□□□□□ -2.35
LSM3P62310 MRPS36P1-201ENST00000421291 307 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.36□□□□□ -2.35
LSM3P62310 AL590556.1-201ENST00000423231 483 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AC108059.3-201ENST00000456388 214 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AL139824.2-201ENST00000458731 1095 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AC005840.1-201ENST00000498412 377 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.36□□□□□ -2.35
LSM3P62310 AC005741.1-201ENST00000511094 432 ntBASIC0.36□□□□□ -2.35
LSM3P62310 Y_RNA.687-201ENST00000516558 91 ntBASIC0.36□□□□□ -2.35
LSM3P62310 SUMO2P16-201ENST00000519475 264 ntBASIC0.36□□□□□ -2.35
LSM3P62310 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.36□□□□□ -2.35
LSM3P62310 AC025423.5-201ENST00000550230 219 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.36□□□□□ -2.35
LSM3P62310 VN1R82P-201ENST00000601481 356 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AC069545.1-201ENST00000605671 358 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AC124016.2-201ENST00000610058 665 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AC104073.3-201ENST00000610942 955 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AL354696.1-201ENST00000614652 497 ntBASIC0.36□□□□□ -2.35
LSM3P62310 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AC007792.1-201ENST00000623023 402 ntBASIC0.36□□□□□ -2.35
LSM3P62310 AC106858.1-201ENST00000637497 429 ntBASIC0.36□□□□□ -2.35
LSM3P62310 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.36□□□□□ -2.35
LSM3P62310 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.36□□□□□ -2.35
LSM3P62310 AC134026.1-201ENST00000623249 2239 ntBASIC0.36□□□□□ -2.35
LSM3P62310 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
LSM3P62310 AL159152.1-201ENST00000635019 2587 ntBASIC0.35□□□□□ -2.35
LSM3P62310 RNU1-96P-201ENST00000364163 162 ntBASIC0.35□□□□□ -2.35
LSM3P62310 SMIM11P1-201ENST00000369586 178 ntBASIC0.35□□□□□ -2.35
LSM3P62310 MIR10A-201ENST00000385043 110 ntBASIC0.35□□□□□ -2.35
LSM3P62310 MIR942-201ENST00000401111 86 ntBASIC0.35□□□□□ -2.35
LSM3P62310 RNA5SP111-201ENST00000411386 101 ntBASIC0.35□□□□□ -2.35
LSM3P62310 MTCO3P41-201ENST00000414801 328 ntBASIC0.35□□□□□ -2.35
LSM3P62310 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.35□□□□□ -2.35
LSM3P62310 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.35□□□□□ -2.35
LSM3P62310 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
LSM3P62310 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.35□□□□□ -2.35
LSM3P62310 RAB28P5-201ENST00000427490 651 ntBASIC0.35□□□□□ -2.35
LSM3P62310 MTND1P18-201ENST00000448191 573 ntBASIC0.35□□□□□ -2.35
LSM3P62310 ATP5J2P3-201ENST00000451550 258 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms