Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MIR4498-201ENST00000577599 66 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.29□□□□□ -2.36
CKS1BP61024 MIR3976-201ENST00000606807 139 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.29□□□□□ -2.36
CKS1BP61024 AL159153.1-201ENST00000619688 317 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 AC005858.4-201ENST00000623191 700 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.29□□□□□ -2.36
CKS1BP61024 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.29□□□□□ -2.36
CKS1BP61024 ELL2P3-201ENST00000457883 1602 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 MIR340-201ENST00000362125 95 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 RNU6-1123P-201ENST00000362347 106 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 Y_RNA.338-201ENST00000365320 114 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 RNU6-945P-201ENST00000383947 107 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 SNORD65.1-201ENST00000390889 71 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 COX6CP10-201ENST00000416832 224 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 SEPT14P24-201ENST00000447236 180 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 GAPDHP17-201ENST00000449858 1001 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 RNU6-229P-201ENST00000516614 102 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 AP001893.2-201ENST00000526949 202 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 AC087897.1-201ENST00000550134 156 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 AL442163.3-201ENST00000554110 156 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.28□□□□□ -2.36
CKS1BP61024 BNIP3P8-201ENST00000597863 560 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 KATNBL1P5-201ENST00000605015 517 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 AL451064.1-201ENST00000607718 471 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.28□□□□□ -2.36
CKS1BP61024 AP000676.3-201ENST00000623299 569 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 AL512643.1-201ENST00000635735 524 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 MIR6767-201ENST00000637302 66 ntBASIC0.28□□□□□ -2.36
CKS1BP61024 RNU6-321P-201ENST00000410912 106 ntBASIC0.27□□□□□ -2.37
CKS1BP61024 RNU6-1054P-201ENST00000411293 104 ntBASIC0.27□□□□□ -2.37
CKS1BP61024 MTND1P31-201ENST00000449206 961 ntBASIC0.27□□□□□ -2.37
CKS1BP61024 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.27□□□□□ -2.37
CKS1BP61024 HMGB1P28-201ENST00000507778 552 ntBASIC0.27□□□□□ -2.37
CKS1BP61024 AC025678.1-201ENST00000567861 338 ntBASIC0.27□□□□□ -2.37
CKS1BP61024 MIR4769-201ENST00000584126 77 ntBASIC0.27□□□□□ -2.37
CKS1BP61024 FAM106DP-201ENST00000586416 501 ntBASIC0.27□□□□□ -2.37
CKS1BP61024 MIR6516-201ENST00000630554 81 ntBASIC0.27□□□□□ -2.37
CKS1BP61024 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
CKS1BP61024 AL079343.1-201ENST00000572358 1771 ntBASIC0.27□□□□□ -2.37
CKS1BP61024 RNU6-1284P-201ENST00000363701 100 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 U6.112-201ENST00000384129 70 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 AL031577.2-201ENST00000404133 280 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.26□□□□□ -2.37
CKS1BP61024 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.26□□□□□ -2.37
CKS1BP61024 FO393414.1-201ENST00000428697 1184 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 AL591704.1-201ENST00000432574 275 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 MTCO3P18-201ENST00000440206 761 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 MTCO3P43-201ENST00000440974 771 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 MTND5P14-201ENST00000441481 1267 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 ATP5J2P3-201ENST00000451550 258 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 RNU7-59P-201ENST00000459101 61 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 MTND1P3-201ENST00000484956 952 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 MTCO3P7-201ENST00000510008 774 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 RNU6-1053P-201ENST00000515930 101 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 RNU6-1315P-201ENST00000517187 99 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.26□□□□□ -2.37
CKS1BP61024 AC011604.1-201ENST00000545978 196 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 AC092325.1-201ENST00000566449 554 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 MIR4709-201ENST00000577272 72 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.26□□□□□ -2.37
CKS1BP61024 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.26□□□□□ -2.37
CKS1BP61024 AL358072.1-201ENST00000604156 575 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 AC083806.3-201ENST00000614016 455 ntBASIC0.26□□□□□ -2.37
CKS1BP61024 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.26□□□□□ -2.37
CKS1BP61024 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.26□□□□□ -2.37
CKS1BP61024 OR4G1P-203ENST00000641984 1631 ntBASIC0.25□□□□□ -2.37
CKS1BP61024 SNORD3E-201ENST00000362899 217 ntBASIC0.25□□□□□ -2.37
CKS1BP61024 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
CKS1BP61024 RNU6-1025P-201ENST00000410629 104 ntBASIC0.25□□□□□ -2.37
CKS1BP61024 ARL5AP1-201ENST00000418991 388 ntBASIC0.25□□□□□ -2.37
CKS1BP61024 MTND4LP7-201ENST00000431728 294 ntBASIC0.25□□□□□ -2.37
CKS1BP61024 MTND4P25-201ENST00000441039 533 ntBASIC0.25□□□□□ -2.37
CKS1BP61024 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.25□□□□□ -2.37
CKS1BP61024 Z73417.1-201ENST00000447373 778 ntBASIC0.25□□□□□ -2.37
CKS1BP61024 MTCYBP1-201ENST00000454315 1119 ntBASIC0.25□□□□□ -2.37
CKS1BP61024 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.25□□□□□ -2.37
CKS1BP61024 MTND2P33-201ENST00000506452 1031 ntBASIC0.25□□□□□ -2.37
CKS1BP61024 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.25□□□□□ -2.37
CKS1BP61024 AC060771.1-201ENST00000582031 164 ntBASIC0.25□□□□□ -2.37
CKS1BP61024 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.25□□□□□ -2.37
CKS1BP61024 AC023934.1-201ENST00000574529 2389 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 OR4G2P-201ENST00000328113 903 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 MIR96-201ENST00000362288 78 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 RNU6-862P-201ENST00000362804 105 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 SNORD32B-201ENST00000364460 84 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 RNU1-93P-201ENST00000364704 169 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 MTCO1P21-201ENST00000416634 589 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.24□□□□□ -2.37
CKS1BP61024 ELOCP9-201ENST00000418624 239 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.24□□□□□ -2.37
CKS1BP61024 ISCA1P6-201ENST00000427740 390 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.24□□□□□ -2.37
CKS1BP61024 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.24□□□□□ -2.37
CKS1BP61024 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.24□□□□□ -2.37
CKS1BP61024 AC048334.1-201ENST00000477975 159 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms