Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 RNU6-438P-201ENST00000365561 103 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 SNORA32.2-201ENST00000384049 122 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
HIST1H2BDP58876 AL356776.1-201ENST00000406574 447 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 AC004965.1-201ENST00000413033 213 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 AC114491.1-201ENST00000416095 246 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.68□□□□□ -2.3
HIST1H2BDP58876 MTCYBP39-201ENST00000437562 491 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 snoU13.27-201ENST00000459278 104 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 AL049829.1-201ENST00000465411 156 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 AC016550.1-201ENST00000505348 785 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.68□□□□□ -2.3
HIST1H2BDP58876 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.68□□□□□ -2.3
HIST1H2BDP58876 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.68□□□□□ -2.3
HIST1H2BDP58876 CYCSP23-201ENST00000519781 313 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 MTATP6P15-201ENST00000527233 835 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 AP003168.1-201ENST00000530091 307 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC0.68□□□□□ -2.3
HIST1H2BDP58876 MIR3664-201ENST00000579074 99 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.68□□□□□ -2.3
HIST1H2BDP58876 ZNF209P-201ENST00000593450 2304 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 BNIP3P8-201ENST00000597863 560 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 MIR6845-201ENST00000613182 61 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.68□□□□□ -2.3
HIST1H2BDP58876 AL138955.1-201ENST00000622881 1040 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 SNORD98-201ENST00000636377 67 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 MTND4P16-201ENST00000466108 1367 ntBASIC0.68□□□□□ -2.3
HIST1H2BDP58876 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
HIST1H2BDP58876 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AC073343.1-201ENST00000328239 651 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 Y_RNA.126-201ENST00000363382 111 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 SNORD114-2-201ENST00000363953 78 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 RNU5E-7P-201ENST00000365290 117 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 RNU6-142P-201ENST00000384019 107 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.67□□□□□ -2.3
HIST1H2BDP58876 EEF1A1P40-201ENST00000412883 573 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 ARL5AP1-201ENST00000418991 388 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.67□□□□□ -2.3
HIST1H2BDP58876 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 MTND3P1-201ENST00000441336 220 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 MTND1P12-201ENST00000455231 147 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AP000797.1-201ENST00000478870 387 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AC093852.1-201ENST00000503587 266 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.67□□□□□ -2.3
HIST1H2BDP58876 RNA5SP503-201ENST00000517047 117 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AC087883.1-201ENST00000551882 391 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AC109446.1-201ENST00000566172 220 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AC110760.3-201ENST00000598794 467 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AL391646.1-201ENST00000603860 190 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AC121334.2-201ENST00000605387 271 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.67□□□□□ -2.3
HIST1H2BDP58876 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.67□□□□□ -2.3
HIST1H2BDP58876 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
HIST1H2BDP58876 RNU1-96P-201ENST00000364163 162 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 MIR515-2-201ENST00000384883 83 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 MIR515-1-201ENST00000384884 83 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 MTCYBP2-201ENST00000407745 171 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 SNORA3.2-201ENST00000408221 125 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 RNU6ATAC37P-201ENST00000408328 131 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 AC013410.2-201ENST00000422627 201 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.66□□□□□ -2.3
HIST1H2BDP58876 MTCO3P29-201ENST00000432119 779 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 H2AFZP6-201ENST00000444403 394 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.66□□□□□ -2.3
HIST1H2BDP58876 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 TOMM22P6-201ENST00000465035 409 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.66□□□□□ -2.3
HIST1H2BDP58876 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.66□□□□□ -2.3
HIST1H2BDP58876 AC108078.2-201ENST00000510750 236 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.66□□□□□ -2.3
HIST1H2BDP58876 AC022616.6-201ENST00000520479 119 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 SNORA59B-202ENST00000578183 701 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 AL139286.2-201ENST00000606838 396 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.66□□□□□ -2.3
HIST1H2BDP58876 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 AC068647.2-201ENST00000637380 353 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 AC106858.1-201ENST00000637497 429 ntBASIC0.66□□□□□ -2.3
HIST1H2BDP58876 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.3
HIST1H2BDP58876 SNORD56.2-201ENST00000363242 71 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 RNU1-36P-201ENST00000365130 165 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 MIR670-201ENST00000390142 98 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 U8.13-201ENST00000390842 128 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AL117342.1-201ENST00000404861 406 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 RN7SKP61-201ENST00000410642 295 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 MTCO1P21-201ENST00000416634 589 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.65□□□□□ -2.31
HIST1H2BDP58876 CALM2P2-201ENST00000428512 440 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.65□□□□□ -2.31
HIST1H2BDP58876 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.65□□□□□ -2.31
HIST1H2BDP58876 HSPE1P13-201ENST00000451143 297 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.65□□□□□ -2.31
HIST1H2BDP58876 MTND2P31-201ENST00000512602 616 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 ACA64.5-201ENST00000516207 127 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 SCARNA16.2-201ENST00000516520 172 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms