Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC090525.1-201ENST00000479116 478 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 AC008526.1-201ENST00000509149 338 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 SCARNA17.1-201ENST00000516211 143 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 SCARNA17.2-201ENST00000516334 143 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 RNU6-566P-201ENST00000516790 107 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 AC105029.1-201ENST00000520250 669 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 AP005639.2-201ENST00000527592 928 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HDAC4P56524 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.86□□□□□ -1.95
HDAC4P56524 RPS3AP23-202ENST00000574601 686 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HDAC4P56524 C8orf59P2-201ENST00000603441 271 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.86□□□□□ -1.95
HDAC4P56524 AL132765.2-201ENST00000610812 351 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 AC011890.2-201ENST00000613393 294 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 SCARNA17.4-201ENST00000614296 143 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 AC112487.2-201ENST00000637950 304 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HDAC4P56524 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HDAC4P56524 RNU5E-7P-201ENST00000365290 117 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 RNU6-1329P-201ENST00000365664 107 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 SET-203ENST00000372688 801 ntTSL 2 BASIC2.85□□□□□ -1.95
HDAC4P56524 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HDAC4P56524 AL138827.1-201ENST00000402666 306 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 AC092427.1-202ENST00000430569 476 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 AC087499.2-201ENST00000432861 149 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 AP000705.1-201ENST00000454567 350 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 MTND1P11-201ENST00000456661 876 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.85□□□□□ -1.95
HDAC4P56524 RNU5F-8P-201ENST00000515941 111 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 RNA5SP356-201ENST00000515972 94 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 RNU6-277P-201ENST00000516272 106 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 Y_RNA.682-201ENST00000516457 100 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 ACA59.2-201ENST00000517061 156 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 RNA5SP454-201ENST00000517231 127 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 SCARNA11.3-201ENST00000517276 130 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.85□□□□□ -1.95
HDAC4P56524 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.85□□□□□ -1.95
HDAC4P56524 ELOCP31-201ENST00000540463 467 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.85□□□□□ -1.95
HDAC4P56524 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.85□□□□□ -1.95
HDAC4P56524 FGF7P1-201ENST00000582820 288 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.85□□□□□ -1.95
HDAC4P56524 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.85□□□□□ -1.95
HDAC4P56524 uc_338.15-201ENST00000615470 191 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 AC104985.2-201ENST00000620598 500 ntBASIC2.85□□□□□ -1.95
HDAC4P56524 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.85□□□□□ -1.95
HDAC4P56524 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HDAC4P56524 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 RNA5SP393-201ENST00000363423 117 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.84□□□□□ -1.95
HDAC4P56524 RNU6-1083P-201ENST00000384022 107 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 RNU6-19P-201ENST00000384718 107 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 AL513475.1-201ENST00000406602 315 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 MIR548K-201ENST00000408406 116 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.84□□□□□ -1.95
HDAC4P56524 AL117339.3-201ENST00000418733 162 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.84□□□□□ -1.95
HDAC4P56524 AL365400.1-201ENST00000431854 640 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 MTND1P17-201ENST00000448961 204 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 AC013470.1-201ENST00000453438 462 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 MTND4P17-201ENST00000470444 350 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 GZMAP1-201ENST00000503054 631 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 FGF7P4-201ENST00000509595 295 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 RN7SKP132-201ENST00000516001 208 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 RNA5SP367-201ENST00000516557 118 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 SNORA31.18-201ENST00000517043 134 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 RN7SKP40-201ENST00000517211 242 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 AC100830.2-201ENST00000581636 240 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 MIR3670-2-201ENST00000582974 65 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 MIR3670-1-201ENST00000584160 65 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 MIR3670-3-201ENST00000584855 65 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 AL391813.1-201ENST00000603098 260 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 AC091152.3-201ENST00000604227 325 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 uc_338.5-201ENST00000611839 155 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 MIR3670-4-201ENST00000612260 65 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 AC009233.1-201ENST00000616477 371 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.84□□□□□ -1.95
HDAC4P56524 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
HDAC4P56524 RNU6-858P-201ENST00000362436 107 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 RNU6-78P-201ENST00000362897 107 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 RNU6-461P-201ENST00000364195 107 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 RNU6-95P-201ENST00000384697 107 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 FTH1P15-201ENST00000406984 280 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 MIR1261-201ENST00000408659 82 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 RNU4-14P-201ENST00000410858 122 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 RNA5SP21-201ENST00000410917 96 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 AL121890.1-201ENST00000435457 205 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 MTND4LP16-201ENST00000440828 295 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 AC107626.1-201ENST00000471084 183 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 MRPL42P6-201ENST00000486397 371 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 MTND5P5-201ENST00000503764 376 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 MTCYBP40-201ENST00000509390 1135 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 SNORA43.2-201ENST00000516652 128 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 AC109479.2-201ENST00000517842 174 ntBASIC2.83□□□□□ -1.96
HDAC4P56524 AC104576.1-201ENST00000524225 88 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms