Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 U2.10-201ENST00000620268 191 ntBASIC2.21□□□□□ -2.06
VCPP55072 YWHAEP7-203ENST00000622054 312 ntBASIC2.21□□□□□ -2.06
VCPP55072 AC005609.4-201ENST00000625071 447 ntBASIC2.21□□□□□ -2.06
VCPP55072 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
VCPP55072 Y_RNA.1-201ENST00000352915 104 ntBASIC2.2□□□□□ -2.06
VCPP55072 RNU6-715P-201ENST00000365204 103 ntBASIC2.2□□□□□ -2.06
VCPP55072 RNU6-45P-201ENST00000384471 107 ntBASIC2.2□□□□□ -2.06
VCPP55072 RNU2-66P-201ENST00000410650 161 ntBASIC2.2□□□□□ -2.06
VCPP55072 PGBD4P6-201ENST00000421501 610 ntBASIC2.2□□□□□ -2.06
VCPP55072 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.2□□□□□ -2.06
VCPP55072 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.2□□□□□ -2.06
VCPP55072 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.2□□□□□ -2.06
VCPP55072 AC011005.2-201ENST00000487324 359 ntBASIC2.2□□□□□ -2.06
VCPP55072 RPL22P13-201ENST00000493291 347 ntBASIC2.2□□□□□ -2.06
VCPP55072 AC008526.1-201ENST00000509149 338 ntBASIC2.2□□□□□ -2.06
VCPP55072 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.2□□□□□ -2.06
VCPP55072 RNU6-1178P-201ENST00000516674 107 ntBASIC2.2□□□□□ -2.06
VCPP55072 MIR514B-201ENST00000516774 80 ntBASIC2.2□□□□□ -2.06
VCPP55072 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.2□□□□□ -2.06
VCPP55072 AC008752.3-201ENST00000588113 712 ntBASIC2.2□□□□□ -2.06
VCPP55072 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.2□□□□□ -2.06
VCPP55072 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.2□□□□□ -2.06
VCPP55072 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.2□□□□□ -2.06
VCPP55072 AC138627.2-201ENST00000624202 601 ntBASIC2.2□□□□□ -2.06
VCPP55072 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.2□□□□□ -2.06
VCPP55072 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
VCPP55072 AC131280.1-202ENST00000624067 4211 ntBASIC2.2□□□□□ -2.06
VCPP55072 SNORA40.18-201ENST00000391200 128 ntBASIC2.19□□□□□ -2.06
VCPP55072 AC068050.1-201ENST00000394891 380 ntBASIC2.19□□□□□ -2.06
VCPP55072 RNU2-29P-201ENST00000410423 189 ntBASIC2.19□□□□□ -2.06
VCPP55072 RNU2-63P-201ENST00000410792 194 ntBASIC2.19□□□□□ -2.06
VCPP55072 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.19□□□□□ -2.06
VCPP55072 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.19□□□□□ -2.06
VCPP55072 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.19□□□□□ -2.06
VCPP55072 RPL23AP7-203ENST00000449021 469 ntBASIC2.19□□□□□ -2.06
VCPP55072 AL021397.1-201ENST00000451806 248 ntBASIC2.19□□□□□ -2.06
VCPP55072 RNU6-717P-201ENST00000459076 104 ntBASIC2.19□□□□□ -2.06
VCPP55072 AC025033.1-201ENST00000463883 194 ntBASIC2.19□□□□□ -2.06
VCPP55072 AC090515.1-201ENST00000465295 476 ntBASIC2.19□□□□□ -2.06
VCPP55072 GMFBP1-201ENST00000467831 427 ntBASIC2.19□□□□□ -2.06
VCPP55072 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
VCPP55072 MTAPP1-201ENST00000489154 819 ntBASIC2.19□□□□□ -2.06
VCPP55072 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.19□□□□□ -2.06
VCPP55072 RNU5B-3P-201ENST00000516601 115 ntBASIC2.19□□□□□ -2.06
VCPP55072 SNORA31.25-201ENST00000517242 134 ntBASIC2.19□□□□□ -2.06
VCPP55072 AC093783.1-201ENST00000612976 329 ntBASIC2.19□□□□□ -2.06
VCPP55072 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
VCPP55072 Z75746.1-201ENST00000440243 2080 ntBASIC2.19□□□□□ -2.06
VCPP55072 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VCPP55072 MTND5P26-201ENST00000426018 1752 ntBASIC2.18□□□□□ -2.06
VCPP55072 RNU6-858P-201ENST00000362436 107 ntBASIC2.18□□□□□ -2.06
VCPP55072 RNU6-942P-201ENST00000363002 107 ntBASIC2.18□□□□□ -2.06
VCPP55072 Y_RNA.194-201ENST00000363985 102 ntBASIC2.18□□□□□ -2.06
VCPP55072 RNU4-40P-201ENST00000364351 143 ntBASIC2.18□□□□□ -2.06
VCPP55072 RNU4-24P-201ENST00000364565 139 ntBASIC2.18□□□□□ -2.06
VCPP55072 RNA5SP160-201ENST00000364866 120 ntBASIC2.18□□□□□ -2.06
VCPP55072 RNU6-259P-201ENST00000383999 107 ntBASIC2.18□□□□□ -2.06
VCPP55072 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
VCPP55072 Y_RNA.559-201ENST00000384686 107 ntBASIC2.18□□□□□ -2.06
VCPP55072 RNU2-16P-201ENST00000410712 136 ntBASIC2.18□□□□□ -2.06
VCPP55072 RNU4-55P-201ENST00000410731 137 ntBASIC2.18□□□□□ -2.06
VCPP55072 RNU6-607P-201ENST00000411283 108 ntBASIC2.18□□□□□ -2.06
VCPP55072 AC016907.1-201ENST00000419483 435 ntBASIC2.18□□□□□ -2.06
VCPP55072 AC010975.2-201ENST00000427781 588 ntBASIC2.18□□□□□ -2.06
VCPP55072 AL669831.1-202ENST00000428504 417 ntBASIC2.18□□□□□ -2.06
VCPP55072 GTF2IP13-201ENST00000438487 386 ntBASIC2.18□□□□□ -2.06
VCPP55072 CALM1P1-201ENST00000442082 433 ntBASIC2.18□□□□□ -2.06
VCPP55072 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.18□□□□□ -2.06
VCPP55072 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.18□□□□□ -2.06
VCPP55072 RPL36AP48-201ENST00000485521 314 ntBASIC2.18□□□□□ -2.06
VCPP55072 MTCO3P9-201ENST00000506989 781 ntBASIC2.18□□□□□ -2.06
VCPP55072 MTCO3P7-201ENST00000510008 774 ntBASIC2.18□□□□□ -2.06
VCPP55072 AC074344.1-201ENST00000512823 224 ntBASIC2.18□□□□□ -2.06
VCPP55072 Y_RNA.687-201ENST00000516558 91 ntBASIC2.18□□□□□ -2.06
VCPP55072 AP004607.1-201ENST00000524456 203 ntBASIC2.18□□□□□ -2.06
VCPP55072 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.18□□□□□ -2.06
VCPP55072 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.18□□□□□ -2.06
VCPP55072 AP005435.4-201ENST00000529514 284 ntBASIC2.18□□□□□ -2.06
VCPP55072 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.18□□□□□ -2.06
VCPP55072 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.18□□□□□ -2.06
VCPP55072 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.18□□□□□ -2.06
VCPP55072 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.18□□□□□ -2.06
VCPP55072 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.18□□□□□ -2.06
VCPP55072 MTATP6P3-201ENST00000581686 676 ntBASIC2.18□□□□□ -2.06
VCPP55072 AC103591.3-201ENST00000608684 209 ntBASIC2.18□□□□□ -2.06
VCPP55072 AC104073.3-201ENST00000610942 955 ntBASIC2.18□□□□□ -2.06
VCPP55072 AC009233.1-201ENST00000616477 371 ntBASIC2.18□□□□□ -2.06
VCPP55072 RMST_4.1-201ENST00000616886 107 ntBASIC2.18□□□□□ -2.06
VCPP55072 SCARNA4-202ENST00000625402 129 ntBASIC2.18□□□□□ -2.06
VCPP55072 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VCPP55072 AC027514.1-201ENST00000588561 1603 ntBASIC2.17□□□□□ -2.06
VCPP55072 AC138393.1-203ENST00000327086 343 ntBASIC2.17□□□□□ -2.06
VCPP55072 OR4G2P-201ENST00000328113 903 ntBASIC2.17□□□□□ -2.06
VCPP55072 Y_RNA.224-201ENST00000364308 111 ntBASIC2.17□□□□□ -2.06
VCPP55072 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VCPP55072 AL133475.1-201ENST00000404414 305 ntBASIC2.17□□□□□ -2.06
VCPP55072 RNU2-3P-201ENST00000410144 191 ntBASIC2.17□□□□□ -2.06
VCPP55072 AL139156.1-201ENST00000412785 841 ntBASIC2.17□□□□□ -2.06
VCPP55072 CYCSP33-201ENST00000414485 327 ntBASIC2.17□□□□□ -2.06
VCPP55072 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms