Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MIR147B-201ENST00000390185 80 ntBASIC3.16□□□□□ -1.9
COPAP53621 RNU6-1050P-201ENST00000410388 107 ntBASIC3.16□□□□□ -1.9
COPAP53621 RNU6-325P-201ENST00000411132 105 ntBASIC3.16□□□□□ -1.9
COPAP53621 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.16□□□□□ -1.9
COPAP53621 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.16□□□□□ -1.9
COPAP53621 AC013470.1-201ENST00000453438 462 ntBASIC3.16□□□□□ -1.9
COPAP53621 AL441985.1-201ENST00000457727 251 ntBASIC3.16□□□□□ -1.9
COPAP53621 U8.21-201ENST00000459536 136 ntBASIC3.16□□□□□ -1.9
COPAP53621 Y_RNA.701-201ENST00000516812 110 ntBASIC3.16□□□□□ -1.9
COPAP53621 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.16□□□□□ -1.9
COPAP53621 AC018462.2-201ENST00000605375 395 ntBASIC3.16□□□□□ -1.9
COPAP53621 AL627309.6-201ENST00000606857 840 ntBASIC3.16□□□□□ -1.9
COPAP53621 MIR6852-201ENST00000621699 66 ntBASIC3.16□□□□□ -1.9
COPAP53621 AC097372.5-201ENST00000623665 376 ntBASIC3.16□□□□□ -1.9
COPAP53621 MIR3529-201ENST00000637713 78 ntBASIC3.16□□□□□ -1.9
COPAP53621 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COPAP53621 KPNA2P1-201ENST00000458289 1591 ntBASIC3.16□□□□□ -1.9
COPAP53621 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
COPAP53621 MTND4P23-201ENST00000447723 1363 ntBASIC3.15□□□□□ -1.9
COPAP53621 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.9
COPAP53621 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
COPAP53621 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
COPAP53621 RPL9P7-201ENST00000330965 580 ntBASIC3.15□□□□□ -1.91
COPAP53621 SNORD56.1-201ENST00000362913 68 ntBASIC3.15□□□□□ -1.91
COPAP53621 RNU6-105P-201ENST00000363909 104 ntBASIC3.15□□□□□ -1.91
COPAP53621 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.15□□□□□ -1.91
COPAP53621 SNORA75.4-201ENST00000391278 119 ntBASIC3.15□□□□□ -1.91
COPAP53621 RN7SKP58-201ENST00000411010 305 ntBASIC3.15□□□□□ -1.91
COPAP53621 RNU6-1245P-201ENST00000411130 106 ntBASIC3.15□□□□□ -1.91
COPAP53621 BMS1P22-201ENST00000414726 313 ntBASIC3.15□□□□□ -1.91
COPAP53621 AL513043.1-201ENST00000439124 535 ntBASIC3.15□□□□□ -1.91
COPAP53621 AC107083.1-201ENST00000439643 279 ntBASIC3.15□□□□□ -1.91
COPAP53621 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.15□□□□□ -1.91
COPAP53621 DAP3P1-201ENST00000441522 278 ntBASIC3.15□□□□□ -1.91
COPAP53621 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.15□□□□□ -1.91
COPAP53621 RPL30P15-201ENST00000457129 321 ntBASIC3.15□□□□□ -1.91
COPAP53621 RPL9P9-202ENST00000466501 579 ntBASIC3.15□□□□□ -1.91
COPAP53621 RPL31P41-201ENST00000477967 372 ntBASIC3.15□□□□□ -1.91
COPAP53621 GZMAP1-201ENST00000503054 631 ntBASIC3.15□□□□□ -1.91
COPAP53621 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.15□□□□□ -1.91
COPAP53621 AC026782.1-201ENST00000512952 449 ntBASIC3.15□□□□□ -1.91
COPAP53621 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.15□□□□□ -1.91
COPAP53621 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.15□□□□□ -1.91
COPAP53621 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.15□□□□□ -1.91
COPAP53621 AC009229.3-201ENST00000608056 282 ntBASIC3.15□□□□□ -1.91
COPAP53621 AL669831.3-213ENST00000636676 183 ntBASIC3.15□□□□□ -1.91
COPAP53621 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
COPAP53621 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
COPAP53621 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.15□□□□□ -1.91
COPAP53621 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
COPAP53621 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COPAP53621 Y_RNA.579-201ENST00000390939 94 ntBASIC3.14□□□□□ -1.91
COPAP53621 Y_RNA.594-201ENST00000410373 140 ntBASIC3.14□□□□□ -1.91
COPAP53621 MTCO2P12-201ENST00000427426 682 ntBASIC3.14□□□□□ -1.91
COPAP53621 AC236972.1-201ENST00000433225 199 ntBASIC3.14□□□□□ -1.91
COPAP53621 AC007677.1-201ENST00000445757 515 ntBASIC3.14□□□□□ -1.91
COPAP53621 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.14□□□□□ -1.91
COPAP53621 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.14□□□□□ -1.91
COPAP53621 SNORD5.1-201ENST00000458800 75 ntBASIC3.14□□□□□ -1.91
COPAP53621 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.14□□□□□ -1.91
COPAP53621 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.14□□□□□ -1.91
COPAP53621 RN7SKP40-201ENST00000517211 242 ntBASIC3.14□□□□□ -1.91
COPAP53621 AC009812.2-201ENST00000517657 457 ntBASIC3.14□□□□□ -1.91
COPAP53621 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.14□□□□□ -1.91
COPAP53621 AC103810.1-201ENST00000579873 453 ntBASIC3.14□□□□□ -1.91
COPAP53621 AL353621.2-201ENST00000605340 133 ntBASIC3.14□□□□□ -1.91
COPAP53621 AC080078.3-201ENST00000605407 463 ntBASIC3.14□□□□□ -1.91
COPAP53621 AP000654.2-201ENST00000605633 586 ntBASIC3.14□□□□□ -1.91
COPAP53621 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.14□□□□□ -1.91
COPAP53621 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
COPAP53621 AC098657.3-201ENST00000620434 263 ntBASIC3.14□□□□□ -1.91
COPAP53621 AC090971.5-201ENST00000621102 293 ntBASIC3.14□□□□□ -1.91
COPAP53621 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COPAP53621 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.14□□□□□ -1.91
COPAP53621 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COPAP53621 Y_RNA.146-201ENST00000363549 102 ntBASIC3.13□□□□□ -1.91
COPAP53621 SNORA71.1-201ENST00000364523 117 ntBASIC3.13□□□□□ -1.91
COPAP53621 RNU6-1317P-201ENST00000364582 104 ntBASIC3.13□□□□□ -1.91
COPAP53621 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
COPAP53621 RNU1-109P-201ENST00000383960 147 ntBASIC3.13□□□□□ -1.91
COPAP53621 RNU6-43P-201ENST00000384302 107 ntBASIC3.13□□□□□ -1.91
COPAP53621 RNU6-748P-201ENST00000384648 107 ntBASIC3.13□□□□□ -1.91
COPAP53621 SNORD15B-201ENST00000384714 146 ntBASIC3.13□□□□□ -1.91
COPAP53621 MIR887-201ENST00000401258 79 ntBASIC3.13□□□□□ -1.91
COPAP53621 AL513475.1-201ENST00000406602 315 ntBASIC3.13□□□□□ -1.91
COPAP53621 MIR1302-11-201ENST00000408051 138 ntBASIC3.13□□□□□ -1.91
COPAP53621 MIR1302-9-201ENST00000408365 138 ntBASIC3.13□□□□□ -1.91
COPAP53621 MIR1302-10-201ENST00000408734 138 ntBASIC3.13□□□□□ -1.91
COPAP53621 RPL19P1-201ENST00000411635 428 ntBASIC3.13□□□□□ -1.91
COPAP53621 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.13□□□□□ -1.91
COPAP53621 AC074117.2-201ENST00000417130 397 ntBASIC3.13□□□□□ -1.91
COPAP53621 AF228730.4-201ENST00000421457 183 ntBASIC3.13□□□□□ -1.91
COPAP53621 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.13□□□□□ -1.91
COPAP53621 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.13□□□□□ -1.91
COPAP53621 AC092427.1-202ENST00000430569 476 ntBASIC3.13□□□□□ -1.91
COPAP53621 USP9YP30-201ENST00000430729 455 ntBASIC3.13□□□□□ -1.91
COPAP53621 AC025750.2-201ENST00000442609 450 ntBASIC3.13□□□□□ -1.91
COPAP53621 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.13□□□□□ -1.91
COPAP53621 AC133134.1-201ENST00000466800 359 ntBASIC3.13□□□□□ -1.91
COPAP53621 AC114801.2-201ENST00000503825 781 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms