Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RPL21P40-201ENST00000428586 483 ntBASIC3.13□□□□□ -1.91
COPB1P53618 AL513043.1-201ENST00000439124 535 ntBASIC3.13□□□□□ -1.91
COPB1P53618 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.13□□□□□ -1.91
COPB1P53618 AL035666.1-201ENST00000446195 348 ntBASIC3.13□□□□□ -1.91
COPB1P53618 NIPA2P5-201ENST00000452282 464 ntBASIC3.13□□□□□ -1.91
COPB1P53618 RPL9P9-202ENST00000466501 579 ntBASIC3.13□□□□□ -1.91
COPB1P53618 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.13□□□□□ -1.91
COPB1P53618 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.13□□□□□ -1.91
COPB1P53618 AC009812.2-201ENST00000517657 457 ntBASIC3.13□□□□□ -1.91
COPB1P53618 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
COPB1P53618 AC103996.1-201ENST00000555468 102 ntBASIC3.13□□□□□ -1.91
COPB1P53618 LINC00933-203ENST00000559812 219 ntBASIC3.13□□□□□ -1.91
COPB1P53618 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.13□□□□□ -1.91
COPB1P53618 AC006504.6-201ENST00000590142 199 ntBASIC3.13□□□□□ -1.91
COPB1P53618 AC009314.1-201ENST00000603871 304 ntBASIC3.13□□□□□ -1.91
COPB1P53618 AL137843.1-201ENST00000605078 385 ntBASIC3.13□□□□□ -1.91
COPB1P53618 AC016925.2-201ENST00000605108 242 ntBASIC3.13□□□□□ -1.91
COPB1P53618 MIR6852-201ENST00000621699 66 ntBASIC3.13□□□□□ -1.91
COPB1P53618 AC006386.2-201ENST00000624491 75 ntBASIC3.13□□□□□ -1.91
COPB1P53618 AC012005.1-201ENST00000624575 75 ntBASIC3.13□□□□□ -1.91
COPB1P53618 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
COPB1P53618 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
COPB1P53618 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
COPB1P53618 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COPB1P53618 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.12□□□□□ -1.91
COPB1P53618 AC092593.1-201ENST00000515413 1815 ntBASIC3.12□□□□□ -1.91
COPB1P53618 Y_RNA.148-201ENST00000363557 117 ntBASIC3.12□□□□□ -1.91
COPB1P53618 U8.8-201ENST00000365399 135 ntBASIC3.12□□□□□ -1.91
COPB1P53618 RNU6-658P-201ENST00000384606 106 ntBASIC3.12□□□□□ -1.91
COPB1P53618 RPS29P13-201ENST00000402041 169 ntBASIC3.12□□□□□ -1.91
COPB1P53618 AL513475.1-201ENST00000406602 315 ntBASIC3.12□□□□□ -1.91
COPB1P53618 U3.37-201ENST00000408528 213 ntBASIC3.12□□□□□ -1.91
COPB1P53618 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.12□□□□□ -1.91
COPB1P53618 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.12□□□□□ -1.91
COPB1P53618 AC099548.1-201ENST00000421443 426 ntBASIC3.12□□□□□ -1.91
COPB1P53618 HMGN2P30-201ENST00000423237 256 ntBASIC3.12□□□□□ -1.91
COPB1P53618 TOMM20P4-201ENST00000427861 435 ntBASIC3.12□□□□□ -1.91
COPB1P53618 AC011816.1-201ENST00000441346 546 ntBASIC3.12□□□□□ -1.91
COPB1P53618 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COPB1P53618 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.12□□□□□ -1.91
COPB1P53618 AC003982.1-202ENST00000469928 248 ntBASIC3.12□□□□□ -1.91
COPB1P53618 AC103975.1-201ENST00000482506 483 ntBASIC3.12□□□□□ -1.91
COPB1P53618 RPS27AP10-201ENST00000496103 208 ntBASIC3.12□□□□□ -1.91
COPB1P53618 AC006445.2-201ENST00000510061 472 ntBASIC3.12□□□□□ -1.91
COPB1P53618 AP002404.1-201ENST00000532005 451 ntBASIC3.12□□□□□ -1.91
COPB1P53618 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.12□□□□□ -1.91
COPB1P53618 AC109446.1-201ENST00000566172 220 ntBASIC3.12□□□□□ -1.91
COPB1P53618 AC005899.2-201ENST00000584353 90 ntBASIC3.12□□□□□ -1.91
COPB1P53618 MIR3976-201ENST00000606807 139 ntBASIC3.12□□□□□ -1.91
COPB1P53618 SCARNA4-202ENST00000625402 129 ntBASIC3.12□□□□□ -1.91
COPB1P53618 AC092435.3-201ENST00000565538 3654 ntBASIC3.12□□□□□ -1.91
COPB1P53618 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.12□□□□□ -1.91
COPB1P53618 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.11□□□□□ -1.91
COPB1P53618 RNU6-78P-201ENST00000362897 107 ntBASIC3.11□□□□□ -1.91
COPB1P53618 RNU6-428P-201ENST00000362942 107 ntBASIC3.11□□□□□ -1.91
COPB1P53618 RNU6-490P-201ENST00000362985 107 ntBASIC3.11□□□□□ -1.91
COPB1P53618 RNU6-942P-201ENST00000363002 107 ntBASIC3.11□□□□□ -1.91
COPB1P53618 Y_RNA.496-201ENST00000384444 101 ntBASIC3.11□□□□□ -1.91
COPB1P53618 RNU6-790P-201ENST00000384479 105 ntBASIC3.11□□□□□ -1.91
COPB1P53618 SNORA1.3-201ENST00000384676 136 ntBASIC3.11□□□□□ -1.91
COPB1P53618 RPS4XP3-201ENST00000398541 413 ntBASIC3.11□□□□□ -1.91
COPB1P53618 BX276092.3-201ENST00000424182 230 ntBASIC3.11□□□□□ -1.91
COPB1P53618 S100A11P2-201ENST00000467589 312 ntBASIC3.11□□□□□ -1.91
COPB1P53618 UBE2DNL-203ENST00000474922 222 ntBASIC3.11□□□□□ -1.91
COPB1P53618 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.11□□□□□ -1.91
COPB1P53618 AC022493.2-201ENST00000506122 481 ntBASIC3.11□□□□□ -1.91
COPB1P53618 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.11□□□□□ -1.91
COPB1P53618 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
COPB1P53618 RNU6-699P-201ENST00000517081 110 ntBASIC3.11□□□□□ -1.91
COPB1P53618 RN7SKP295-201ENST00000517264 153 ntBASIC3.11□□□□□ -1.91
COPB1P53618 RNU6-988P-201ENST00000519081 107 ntBASIC3.11□□□□□ -1.91
COPB1P53618 AC022080.3-201ENST00000544433 482 ntBASIC3.11□□□□□ -1.91
COPB1P53618 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.11□□□□□ -1.91
COPB1P53618 MIR3609-201ENST00000582661 80 ntBASIC3.11□□□□□ -1.91
COPB1P53618 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
COPB1P53618 AL162730.1-201ENST00000605734 292 ntBASIC3.11□□□□□ -1.91
COPB1P53618 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.11□□□□□ -1.91
COPB1P53618 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.11□□□□□ -1.91
COPB1P53618 MIR6134-201ENST00000617606 109 ntBASIC3.11□□□□□ -1.91
COPB1P53618 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
COPB1P53618 AC090617.7-201ENST00000623952 126 ntBASIC3.11□□□□□ -1.91
COPB1P53618 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.1□□□□□ -1.91
COPB1P53618 FAM35BP-202ENST00000497389 3337 ntBASIC3.1□□□□□ -1.91
COPB1P53618 RNU5E-7P-201ENST00000365290 117 ntBASIC3.1□□□□□ -1.91
COPB1P53618 NDUFS5P4-201ENST00000412983 318 ntBASIC3.1□□□□□ -1.91
COPB1P53618 MCFD2P1-201ENST00000417812 300 ntBASIC3.1□□□□□ -1.91
COPB1P53618 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.1□□□□□ -1.91
COPB1P53618 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.1□□□□□ -1.91
COPB1P53618 RPS15AP10-201ENST00000432472 382 ntBASIC3.1□□□□□ -1.91
COPB1P53618 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.1□□□□□ -1.91
COPB1P53618 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.1□□□□□ -1.91
COPB1P53618 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.1□□□□□ -1.91
COPB1P53618 RN7SL297P-201ENST00000483161 293 ntBASIC3.1□□□□□ -1.91
COPB1P53618 RPS29P20-201ENST00000489592 171 ntBASIC3.1□□□□□ -1.91
COPB1P53618 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.1□□□□□ -1.91
COPB1P53618 RNU6-377P-201ENST00000515965 102 ntBASIC3.1□□□□□ -1.91
COPB1P53618 EIF4BP1-201ENST00000554881 351 ntBASIC3.1□□□□□ -1.91
COPB1P53618 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.1□□□□□ -1.91
COPB1P53618 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.1□□□□□ -1.91
COPB1P53618 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms