Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.14□□□□□ -2.07
SMSP52788 AC091805.2-201ENST00000603848 235 ntBASIC2.14□□□□□ -2.07
SMSP52788 RNU6-6P-201ENST00000606623 107 ntBASIC2.14□□□□□ -2.07
SMSP52788 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
SMSP52788 AC016717.2-201ENST00000609089 5141 ntBASIC2.14□□□□□ -2.07
SMSP52788 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SMSP52788 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SMSP52788 Y_RNA.1-201ENST00000352915 104 ntBASIC2.13□□□□□ -2.07
SMSP52788 Y_RNA.296-201ENST00000364930 108 ntBASIC2.13□□□□□ -2.07
SMSP52788 RNU6-996P-201ENST00000365438 107 ntBASIC2.13□□□□□ -2.07
SMSP52788 Y_RNA.359-201ENST00000365498 102 ntBASIC2.13□□□□□ -2.07
SMSP52788 RNU6-1158P-201ENST00000391167 107 ntBASIC2.13□□□□□ -2.07
SMSP52788 RPS29P13-201ENST00000402041 169 ntBASIC2.13□□□□□ -2.07
SMSP52788 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.13□□□□□ -2.07
SMSP52788 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.13□□□□□ -2.07
SMSP52788 AL591806.2-201ENST00000433122 173 ntBASIC2.13□□□□□ -2.07
SMSP52788 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.13□□□□□ -2.07
SMSP52788 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.13□□□□□ -2.07
SMSP52788 USP9YP8-201ENST00000441913 500 ntBASIC2.13□□□□□ -2.07
SMSP52788 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.13□□□□□ -2.07
SMSP52788 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.13□□□□□ -2.07
SMSP52788 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.13□□□□□ -2.07
SMSP52788 TPT1P7-201ENST00000458300 517 ntBASIC2.13□□□□□ -2.07
SMSP52788 RPL30P12-201ENST00000474666 353 ntBASIC2.13□□□□□ -2.07
SMSP52788 AL163973.1-201ENST00000484753 577 ntBASIC2.13□□□□□ -2.07
SMSP52788 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.13□□□□□ -2.07
SMSP52788 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.13□□□□□ -2.07
SMSP52788 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.13□□□□□ -2.07
SMSP52788 AC115990.1-201ENST00000526957 301 ntBASIC2.13□□□□□ -2.07
SMSP52788 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.13□□□□□ -2.07
SMSP52788 AP000889.2-201ENST00000532684 490 ntBASIC2.13□□□□□ -2.07
SMSP52788 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.13□□□□□ -2.07
SMSP52788 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.13□□□□□ -2.07
SMSP52788 AC026464.5-201ENST00000562497 722 ntBASIC2.13□□□□□ -2.07
SMSP52788 AC233702.2-202ENST00000562547 291 ntBASIC2.13□□□□□ -2.07
SMSP52788 AC007336.1-201ENST00000576365 3828 ntBASIC2.13□□□□□ -2.07
SMSP52788 ELOCP5-201ENST00000604924 333 ntBASIC2.13□□□□□ -2.07
SMSP52788 AC007684.1-201ENST00000609671 477 ntBASIC2.13□□□□□ -2.07
SMSP52788 AC009090.3-201ENST00000616553 565 ntBASIC2.13□□□□□ -2.07
SMSP52788 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SMSP52788 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.13□□□□□ -2.07
SMSP52788 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.12□□□□□ -2.07
SMSP52788 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMSP52788 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
SMSP52788 RNU6-212P-201ENST00000362642 104 ntBASIC2.12□□□□□ -2.07
SMSP52788 SNORD114-1-201ENST00000362705 72 ntBASIC2.12□□□□□ -2.07
SMSP52788 RNU6-1285P-201ENST00000363480 105 ntBASIC2.12□□□□□ -2.07
SMSP52788 RNU6-1274P-201ENST00000384557 107 ntBASIC2.12□□□□□ -2.07
SMSP52788 SNORA40.19-201ENST00000390846 128 ntBASIC2.12□□□□□ -2.07
SMSP52788 RNU2-48P-201ENST00000410694 191 ntBASIC2.12□□□□□ -2.07
SMSP52788 RNU6-1245P-201ENST00000411130 106 ntBASIC2.12□□□□□ -2.07
SMSP52788 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.12□□□□□ -2.07
SMSP52788 USP9YP27-201ENST00000418455 438 ntBASIC2.12□□□□□ -2.07
SMSP52788 MORF4L1P6-201ENST00000418771 268 ntBASIC2.12□□□□□ -2.07
SMSP52788 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.12□□□□□ -2.07
SMSP52788 GPM6BP3-201ENST00000442797 145 ntBASIC2.12□□□□□ -2.07
SMSP52788 MTND1P29-201ENST00000448112 647 ntBASIC2.12□□□□□ -2.07
SMSP52788 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.12□□□□□ -2.07
SMSP52788 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.12□□□□□ -2.07
SMSP52788 AC026436.1-201ENST00000510537 270 ntBASIC2.12□□□□□ -2.07
SMSP52788 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.12□□□□□ -2.07
SMSP52788 AC069113.1-201ENST00000517763 267 ntBASIC2.12□□□□□ -2.07
SMSP52788 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.12□□□□□ -2.07
SMSP52788 AC022880.1-201ENST00000534017 973 ntBASIC2.12□□□□□ -2.07
SMSP52788 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.12□□□□□ -2.07
SMSP52788 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.12□□□□□ -2.07
SMSP52788 NBR2-204ENST00000587322 63 ntBASIC2.12□□□□□ -2.07
SMSP52788 AC007229.1-201ENST00000590455 412 ntBASIC2.12□□□□□ -2.07
SMSP52788 AC087683.1-201ENST00000591187 441 ntBASIC2.12□□□□□ -2.07
SMSP52788 AL356157.2-201ENST00000605122 111 ntBASIC2.12□□□□□ -2.07
SMSP52788 AC103810.6-201ENST00000606708 136 ntBASIC2.12□□□□□ -2.07
SMSP52788 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SMSP52788 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
SMSP52788 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMSP52788 ZNF72P-201ENST00000425869 1908 ntBASIC2.11□□□□□ -2.07
SMSP52788 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SMSP52788 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SMSP52788 RNU6-266P-201ENST00000364225 107 ntBASIC2.11□□□□□ -2.07
SMSP52788 SNORD116-2-201ENST00000384274 95 ntBASIC2.11□□□□□ -2.07
SMSP52788 SNORD116-6-201ENST00000384711 96 ntBASIC2.11□□□□□ -2.07
SMSP52788 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SMSP52788 MTND1P23-201ENST00000416931 372 ntBASIC2.11□□□□□ -2.07
SMSP52788 AL117339.3-201ENST00000418733 162 ntBASIC2.11□□□□□ -2.07
SMSP52788 AL353193.1-201ENST00000421444 268 ntBASIC2.11□□□□□ -2.07
SMSP52788 HMGN2P3-201ENST00000433603 273 ntBASIC2.11□□□□□ -2.07
SMSP52788 HMGN2P5-201ENST00000436882 273 ntBASIC2.11□□□□□ -2.07
SMSP52788 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SMSP52788 AC243964.1-201ENST00000441814 261 ntBASIC2.11□□□□□ -2.07
SMSP52788 AL353752.1-201ENST00000454946 260 ntBASIC2.11□□□□□ -2.07
SMSP52788 AC022447.4-201ENST00000504053 364 ntBASIC2.11□□□□□ -2.07
SMSP52788 SNORA40.12-201ENST00000516329 111 ntBASIC2.11□□□□□ -2.07
SMSP52788 RNU6-405P-201ENST00000516637 110 ntBASIC2.11□□□□□ -2.07
SMSP52788 RNU2-19P-201ENST00000517288 84 ntBASIC2.11□□□□□ -2.07
SMSP52788 HSPE1P18-201ENST00000517602 280 ntBASIC2.11□□□□□ -2.07
SMSP52788 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.11□□□□□ -2.07
SMSP52788 SNRPGP18-201ENST00000553000 214 ntBASIC2.11□□□□□ -2.07
SMSP52788 MIR4424-201ENST00000585257 86 ntBASIC2.11□□□□□ -2.07
SMSP52788 AC012507.3-201ENST00000603556 477 ntBASIC2.11□□□□□ -2.07
SMSP52788 SNRPGP17-201ENST00000603780 214 ntBASIC2.11□□□□□ -2.07
SMSP52788 APOOP1-201ENST00000604695 592 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms