Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 SNORA19-201ENST00000384737 128 ntBASIC3.27□□□□□ -1.89
CLK3P49761 MIR218-2-201ENST00000385006 110 ntBASIC3.27□□□□□ -1.89
CLK3P49761 MTCYBP2-201ENST00000407745 171 ntBASIC3.27□□□□□ -1.89
CLK3P49761 RAB9AP3-201ENST00000412737 573 ntBASIC3.27□□□□□ -1.89
CLK3P49761 RAB9AP1-201ENST00000449393 573 ntBASIC3.27□□□□□ -1.89
CLK3P49761 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.27□□□□□ -1.89
CLK3P49761 RPS23P5-201ENST00000495419 428 ntBASIC3.27□□□□□ -1.89
CLK3P49761 AC093663.1-201ENST00000497190 394 ntBASIC3.27□□□□□ -1.89
CLK3P49761 AC104619.4-201ENST00000510773 249 ntBASIC3.27□□□□□ -1.89
CLK3P49761 Y_RNA.713-201ENST00000517013 96 ntBASIC3.27□□□□□ -1.89
CLK3P49761 AC068657.1-201ENST00000520807 306 ntBASIC3.27□□□□□ -1.89
CLK3P49761 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.27□□□□□ -1.89
CLK3P49761 AC073410.2-201ENST00000603240 332 ntBASIC3.27□□□□□ -1.89
CLK3P49761 AC009314.1-201ENST00000603871 304 ntBASIC3.27□□□□□ -1.89
CLK3P49761 AC136601.2-201ENST00000604356 474 ntBASIC3.27□□□□□ -1.89
CLK3P49761 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.27□□□□□ -1.89
CLK3P49761 MFSD8-233ENST00000641482 4860 ntBASIC3.27□□□□□ -1.89
CLK3P49761 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CLK3P49761 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.27□□□□□ -1.89
CLK3P49761 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLK3P49761 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLK3P49761 SNORD81.1-201ENST00000363064 77 ntBASIC3.26□□□□□ -1.89
CLK3P49761 Y_RNA.150-201ENST00000363562 102 ntBASIC3.26□□□□□ -1.89
CLK3P49761 Y_RNA.274-201ENST00000364714 101 ntBASIC3.26□□□□□ -1.89
CLK3P49761 U3.13-201ENST00000364804 214 ntBASIC3.26□□□□□ -1.89
CLK3P49761 RNU6-746P-201ENST00000384112 109 ntBASIC3.26□□□□□ -1.89
CLK3P49761 MIR134-201ENST00000385258 73 ntBASIC3.26□□□□□ -1.89
CLK3P49761 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLK3P49761 SNORD115-46-201ENST00000390982 71 ntBASIC3.26□□□□□ -1.89
CLK3P49761 RNA5SP494-201ENST00000410653 129 ntBASIC3.26□□□□□ -1.89
CLK3P49761 AP000275.1-201ENST00000411943 390 ntBASIC3.26□□□□□ -1.89
CLK3P49761 SNORD56-201ENST00000413522 71 ntBASIC3.26□□□□□ -1.89
CLK3P49761 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.26□□□□□ -1.89
CLK3P49761 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.26□□□□□ -1.89
CLK3P49761 AP000907.1-201ENST00000428428 510 ntBASIC3.26□□□□□ -1.89
CLK3P49761 AL357552.1-201ENST00000445254 415 ntBASIC3.26□□□□□ -1.89
CLK3P49761 AL138752.1-201ENST00000452964 351 ntBASIC3.26□□□□□ -1.89
CLK3P49761 AC106707.2-201ENST00000484182 374 ntBASIC3.26□□□□□ -1.89
CLK3P49761 AC006445.2-201ENST00000510061 472 ntBASIC3.26□□□□□ -1.89
CLK3P49761 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.26□□□□□ -1.89
CLK3P49761 AC034105.4-201ENST00000568304 277 ntBASIC3.26□□□□□ -1.89
CLK3P49761 MIR4474-201ENST00000579189 78 ntBASIC3.26□□□□□ -1.89
CLK3P49761 AC006557.5-201ENST00000603126 811 ntBASIC3.26□□□□□ -1.89
CLK3P49761 BX284668.6-201ENST00000606899 438 ntBASIC3.26□□□□□ -1.89
CLK3P49761 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.26□□□□□ -1.89
CLK3P49761 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.26□□□□□ -1.89
CLK3P49761 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLK3P49761 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLK3P49761 MIR412-201ENST00000362142 91 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-37P-201ENST00000362692 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 snoU2_19.2-201ENST00000363024 80 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-11P-201ENST00000364234 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-7-201ENST00000364784 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-8-201ENST00000365467 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-25P-201ENST00000383873 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-1-201ENST00000383898 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-48P-201ENST00000384161 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-36P-201ENST00000384172 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-4P-201ENST00000384205 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-5P-201ENST00000384238 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-3P-201ENST00000384314 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-886P-201ENST00000384319 105 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-16P-201ENST00000384385 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-15P-201ENST00000384534 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-140P-201ENST00000384566 108 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-2-201ENST00000384627 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-29P-201ENST00000384637 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-9-201ENST00000384776 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 MIR215-201ENST00000384858 110 ntBASIC3.25□□□□□ -1.89
CLK3P49761 MRPL35P1-201ENST00000404272 572 ntBASIC3.25□□□□□ -1.89
CLK3P49761 AL603910.2-201ENST00000407268 136 ntBASIC3.25□□□□□ -1.89
CLK3P49761 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.25□□□□□ -1.89
CLK3P49761 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.25□□□□□ -1.89
CLK3P49761 MTND3P9-201ENST00000429526 346 ntBASIC3.25□□□□□ -1.89
CLK3P49761 AL513124.1-201ENST00000450410 614 ntBASIC3.25□□□□□ -1.89
CLK3P49761 FABP5P15-201ENST00000453566 214 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RN7SKP210-201ENST00000459176 261 ntBASIC3.25□□□□□ -1.89
CLK3P49761 AC091179.1-201ENST00000461606 579 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RPL23AP67-201ENST00000465341 474 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
CLK3P49761 AC087190.1-201ENST00000484462 480 ntBASIC3.25□□□□□ -1.89
CLK3P49761 AC107032.1-201ENST00000485945 480 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RPL32P34-201ENST00000486380 400 ntBASIC3.25□□□□□ -1.89
CLK3P49761 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.25□□□□□ -1.89
CLK3P49761 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.25□□□□□ -1.89
CLK3P49761 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.25□□□□□ -1.89
CLK3P49761 AL442163.3-201ENST00000554110 156 ntBASIC3.25□□□□□ -1.89
CLK3P49761 HMGB1P14-201ENST00000557424 591 ntBASIC3.25□□□□□ -1.89
CLK3P49761 MIR3609-201ENST00000582661 80 ntBASIC3.25□□□□□ -1.89
CLK3P49761 RNU6-6P-201ENST00000606623 107 ntBASIC3.25□□□□□ -1.89
CLK3P49761 AC107294.3-201ENST00000609211 526 ntBASIC3.25□□□□□ -1.89
CLK3P49761 AC009318.2-201ENST00000610917 651 ntBASIC3.25□□□□□ -1.89
CLK3P49761 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CLK3P49761 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.25□□□□□ -1.89
CLK3P49761 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.25□□□□□ -1.89
CLK3P49761 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CLK3P49761 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLK3P49761 AC022336.2-201ENST00000568966 2538 ntBASIC3.24□□□□□ -1.89
CLK3P49761 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLK3P49761 MIR148B-201ENST00000362252 99 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms