Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AL513124.1-201ENST00000450410 614 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 MTND1P27-201ENST00000451117 902 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 C1DP4-201ENST00000455429 424 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 RPL30P12-201ENST00000474666 353 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 UBL5P3-201ENST00000475112 231 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.6□□□□□ -2.15
CSNK1A1P48729 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.6□□□□□ -2.15
CSNK1A1P48729 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.6□□□□□ -2.15
CSNK1A1P48729 RNA5SP503-201ENST00000517047 117 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 MIR4419B-201ENST00000577260 68 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.6□□□□□ -2.15
CSNK1A1P48729 BNIP3P25-201ENST00000596023 559 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.6□□□□□ -2.15
CSNK1A1P48729 AL590229.1-201ENST00000603497 542 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 AC025449.1-201ENST00000603896 529 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 AC087752.4-201ENST00000605911 462 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 AL159153.1-201ENST00000619688 317 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 Z69720.2-201ENST00000624755 279 ntBASIC1.6□□□□□ -2.15
CSNK1A1P48729 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CSNK1A1P48729 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CSNK1A1P48729 RNU6-655P-201ENST00000362858 107 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 Y_RNA.324-201ENST00000365165 102 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CSNK1A1P48729 RNU2-48P-201ENST00000410694 191 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 OR9R1P-201ENST00000412200 877 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 BTF3L4P1-201ENST00000413813 468 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 OOSP1P1-201ENST00000423265 274 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 MTND4P32-201ENST00000437189 1237 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.59□□□□□ -2.15
CSNK1A1P48729 AC006026.2-201ENST00000457376 180 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 snoU13.14-201ENST00000459372 104 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 AC006512.1-201ENST00000468816 291 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 AC087884.1-201ENST00000469738 328 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.59□□□□□ -2.15
CSNK1A1P48729 ARL2BPP4-201ENST00000506854 471 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 Y_RNA.695-201ENST00000516715 107 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 RNU6-430P-201ENST00000517078 107 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 RNU6-667P-201ENST00000517186 102 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 AC026407.1-201ENST00000518369 204 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.59□□□□□ -2.15
CSNK1A1P48729 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.59□□□□□ -2.15
CSNK1A1P48729 MIR3122-201ENST00000577243 73 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 MIR4703-201ENST00000577728 79 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 MIR3618-201ENST00000580330 88 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 MIR4713-201ENST00000582691 75 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 AC008945.2-201ENST00000606056 604 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 AC009318.2-201ENST00000610917 651 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 AL158063.1-201ENST00000615349 536 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.59□□□□□ -2.15
CSNK1A1P48729 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.59□□□□□ -2.15
CSNK1A1P48729 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.59□□□□□ -2.15
CSNK1A1P48729 AL390237.1-201ENST00000404226 1415 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CSNK1A1P48729 RNU5E-7P-201ENST00000365290 117 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 SNORA75-201ENST00000384158 137 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 RNU6-1274P-201ENST00000384557 107 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 MIR9-3-201ENST00000385084 90 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 SNORA40.18-201ENST00000391200 128 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 CBX3P9-201ENST00000402326 552 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.58□□□□□ -2.16
CSNK1A1P48729 TOMM20P4-201ENST00000427861 435 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 AL353752.1-201ENST00000454946 260 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 MTCO2P4-201ENST00000517968 247 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.58□□□□□ -2.16
CSNK1A1P48729 AP002963.1-201ENST00000530590 184 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 AP000763.2-201ENST00000540641 163 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 AC022254.1-201ENST00000567857 235 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 MIR3945-201ENST00000581853 98 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 AC008147.4-201ENST00000617570 1204 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 AC072046.2-201ENST00000618366 268 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 Z69908.1-201ENST00000622603 247 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 U4.7-201ENST00000638126 106 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.58□□□□□ -2.16
CSNK1A1P48729 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-37P-201ENST00000362692 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 Y_RNA.159-201ENST00000363674 87 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-1210P-201ENST00000363775 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-11P-201ENST00000364234 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-25P-201ENST00000383873 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-1-201ENST00000383898 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-48P-201ENST00000384161 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-36P-201ENST00000384172 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-4P-201ENST00000384205 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-5P-201ENST00000384238 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-611P-201ENST00000384276 104 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-3P-201ENST00000384314 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-16P-201ENST00000384385 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-15P-201ENST00000384534 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-2-201ENST00000384627 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-29P-201ENST00000384637 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-606P-201ENST00000384721 111 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-9-201ENST00000384776 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-33P-201ENST00000384793 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 AF228730.1-201ENST00000397972 663 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU2-9P-201ENST00000410194 145 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU4-46P-201ENST00000410818 138 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 CETN4P-201ENST00000432407 469 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.57□□□□□ -2.16
CSNK1A1P48729 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.57□□□□□ -2.16
CSNK1A1P48729 RN7SL429P-201ENST00000479090 223 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms