Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RN7SKP287-201ENST00000516546 266 ntBASIC1.73□□□□□ -2.13
SSR1P43307 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.73□□□□□ -2.13
SSR1P43307 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.73□□□□□ -2.13
SSR1P43307 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.73□□□□□ -2.13
SSR1P43307 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.73□□□□□ -2.13
SSR1P43307 AC022616.8-201ENST00000533569 253 ntBASIC1.73□□□□□ -2.13
SSR1P43307 AC011494.1-201ENST00000596454 237 ntBASIC1.73□□□□□ -2.13
SSR1P43307 PRR13P7-201ENST00000605538 430 ntBASIC1.73□□□□□ -2.13
SSR1P43307 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.73□□□□□ -2.13
SSR1P43307 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
SSR1P43307 AC091834.1-201ENST00000614543 472 ntBASIC1.73□□□□□ -2.13
SSR1P43307 AL159153.1-201ENST00000619688 317 ntBASIC1.73□□□□□ -2.13
SSR1P43307 AC079248.2-201ENST00000623779 326 ntBASIC1.73□□□□□ -2.13
SSR1P43307 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.73□□□□□ -2.13
SSR1P43307 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SSR1P43307 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SSR1P43307 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.72□□□□□ -2.13
SSR1P43307 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
SSR1P43307 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SSR1P43307 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.72□□□□□ -2.13
SSR1P43307 RNU6-715P-201ENST00000365204 103 ntBASIC1.72□□□□□ -2.13
SSR1P43307 RNU6-45P-201ENST00000384471 107 ntBASIC1.72□□□□□ -2.13
SSR1P43307 BTF3L4P1-201ENST00000413813 468 ntBASIC1.72□□□□□ -2.13
SSR1P43307 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.72□□□□□ -2.13
SSR1P43307 CYCSP46-201ENST00000423569 204 ntBASIC1.72□□□□□ -2.13
SSR1P43307 TOMM20P4-201ENST00000427861 435 ntBASIC1.72□□□□□ -2.13
SSR1P43307 RPS15AP10-201ENST00000432472 382 ntBASIC1.72□□□□□ -2.13
SSR1P43307 HSPE1P24-201ENST00000450782 238 ntBASIC1.72□□□□□ -2.13
SSR1P43307 ART2BP-201ENST00000453501 499 ntBASIC1.72□□□□□ -2.13
SSR1P43307 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.72□□□□□ -2.13
SSR1P43307 AC093259.1-201ENST00000509755 300 ntBASIC1.72□□□□□ -2.13
SSR1P43307 SNORA25.15-201ENST00000516487 89 ntBASIC1.72□□□□□ -2.13
SSR1P43307 RNU6-295P-201ENST00000516901 104 ntBASIC1.72□□□□□ -2.13
SSR1P43307 MIR5692A1-201ENST00000580523 69 ntBASIC1.72□□□□□ -2.13
SSR1P43307 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.72□□□□□ -2.13
SSR1P43307 MIR98-201ENST00000606724 119 ntBASIC1.72□□□□□ -2.13
SSR1P43307 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.72□□□□□ -2.13
SSR1P43307 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.71□□□□□ -2.14
SSR1P43307 AC006026.1-201ENST00000444025 1803 ntBASIC1.71□□□□□ -2.14
SSR1P43307 MTND5P10-201ENST00000603719 1809 ntBASIC1.71□□□□□ -2.14
SSR1P43307 RNU6-1287P-201ENST00000362914 107 ntBASIC1.71□□□□□ -2.14
SSR1P43307 RNU6-428P-201ENST00000362942 107 ntBASIC1.71□□□□□ -2.14
SSR1P43307 RNU6-282P-201ENST00000365357 103 ntBASIC1.71□□□□□ -2.14
SSR1P43307 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
SSR1P43307 RNU6-1060P-201ENST00000384664 107 ntBASIC1.71□□□□□ -2.14
SSR1P43307 MIR504-201ENST00000385065 83 ntBASIC1.71□□□□□ -2.14
SSR1P43307 MIR30A-201ENST00000385092 71 ntBASIC1.71□□□□□ -2.14
SSR1P43307 U8.13-201ENST00000390842 128 ntBASIC1.71□□□□□ -2.14
SSR1P43307 RNA5SP390-201ENST00000410191 113 ntBASIC1.71□□□□□ -2.14
SSR1P43307 RN7SKP101-201ENST00000411376 320 ntBASIC1.71□□□□□ -2.14
SSR1P43307 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.71□□□□□ -2.14
SSR1P43307 BX295541.1-201ENST00000417774 250 ntBASIC1.71□□□□□ -2.14
SSR1P43307 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.71□□□□□ -2.14
SSR1P43307 AC079448.1-201ENST00000449377 373 ntBASIC1.71□□□□□ -2.14
SSR1P43307 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.71□□□□□ -2.14
SSR1P43307 AL513124.1-201ENST00000450410 614 ntBASIC1.71□□□□□ -2.14
SSR1P43307 AL133217.1-201ENST00000450980 425 ntBASIC1.71□□□□□ -2.14
SSR1P43307 HMGN2P23-201ENST00000456759 269 ntBASIC1.71□□□□□ -2.14
SSR1P43307 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.71□□□□□ -2.14
SSR1P43307 snoU13.14-201ENST00000459372 104 ntBASIC1.71□□□□□ -2.14
SSR1P43307 RPL30P1-201ENST00000488676 339 ntBASIC1.71□□□□□ -2.14
SSR1P43307 AC098862.1-201ENST00000504991 413 ntBASIC1.71□□□□□ -2.14
SSR1P43307 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.71□□□□□ -2.14
SSR1P43307 RNU5F-2P-201ENST00000516066 82 ntBASIC1.71□□□□□ -2.14
SSR1P43307 RNU6-250P-201ENST00000516958 103 ntBASIC1.71□□□□□ -2.14
SSR1P43307 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.71□□□□□ -2.14
SSR1P43307 AC087883.1-201ENST00000551882 391 ntBASIC1.71□□□□□ -2.14
SSR1P43307 MTATP6P24-201ENST00000576835 677 ntBASIC1.71□□□□□ -2.14
SSR1P43307 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.71□□□□□ -2.14
SSR1P43307 AC122133.1-201ENST00000613964 233 ntBASIC1.71□□□□□ -2.14
SSR1P43307 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.71□□□□□ -2.14
SSR1P43307 RNU6-611P-201ENST00000384276 104 ntBASIC1.7□□□□□ -2.14
SSR1P43307 AL627390.1-201ENST00000396055 340 ntBASIC1.7□□□□□ -2.14
SSR1P43307 RAP1BP3-201ENST00000407180 549 ntBASIC1.7□□□□□ -2.14
SSR1P43307 RNU6-607P-201ENST00000411283 108 ntBASIC1.7□□□□□ -2.14
SSR1P43307 HMGN1P14-201ENST00000412459 517 ntBASIC1.7□□□□□ -2.14
SSR1P43307 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.7□□□□□ -2.14
SSR1P43307 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SSR1P43307 AL669831.1-202ENST00000428504 417 ntBASIC1.7□□□□□ -2.14
SSR1P43307 AC009961.2-201ENST00000435771 251 ntBASIC1.7□□□□□ -2.14
SSR1P43307 GTF2IP13-201ENST00000438487 386 ntBASIC1.7□□□□□ -2.14
SSR1P43307 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.7□□□□□ -2.14
SSR1P43307 AC023790.1-201ENST00000482174 347 ntBASIC1.7□□□□□ -2.14
SSR1P43307 AC116337.1-201ENST00000509680 687 ntBASIC1.7□□□□□ -2.14
SSR1P43307 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.7□□□□□ -2.14
SSR1P43307 RNVU1-2-201ENST00000516326 135 ntBASIC1.7□□□□□ -2.14
SSR1P43307 AC008269.2-201ENST00000561915 1105 ntBASIC1.7□□□□□ -2.14
SSR1P43307 AL590229.1-201ENST00000603497 542 ntBASIC1.7□□□□□ -2.14
SSR1P43307 AC068944.2-201ENST00000610373 403 ntBASIC1.7□□□□□ -2.14
SSR1P43307 AC087683.2-201ENST00000611384 326 ntBASIC1.7□□□□□ -2.14
SSR1P43307 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.7□□□□□ -2.14
SSR1P43307 RMST_4.1-201ENST00000616886 107 ntBASIC1.7□□□□□ -2.14
SSR1P43307 AC007792.1-201ENST00000623023 402 ntBASIC1.7□□□□□ -2.14
SSR1P43307 U6.114-201ENST00000636407 96 ntBASIC1.7□□□□□ -2.14
SSR1P43307 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.7□□□□□ -2.14
SSR1P43307 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SSR1P43307 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SSR1P43307 MIR424-201ENST00000362227 98 ntBASIC1.69□□□□□ -2.14
SSR1P43307 RNU6-439P-201ENST00000384188 106 ntBASIC1.69□□□□□ -2.14
SSR1P43307 RNU6-74P-201ENST00000384235 107 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms